FC929962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_DICDI (Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 55/188 (29.26%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 136 TSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 T+L ++T L KE+V FA E + P +D+++ + L K + + NL GI IA+EE+++ ++ + + L N + R+GS Q++KYL L + VG+ +SE +GSD + +A R DG +++NG K W TN A +V A D + + FI Sbjct: 33 TTLSEEETLL--KETVANFANEKVRPLVKVMDETSELNK--GLLKDLFDMNLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYLSMLATNT-VGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITAFI 215
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 55/177 (31.07%), Postives = 79/177 (44.63%), Query Frame = 1 Query: 166 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 + + ++ A + IAP AA +DQ FP++ FN I P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD S FI Sbjct: 21 ELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFN--AIHVPEEYGGQGADSVAACIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFI 194
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDP_MYCTU (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis GN=fadE25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 166 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTD 182
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDP_MYCBO (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis GN=fadE25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 166 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTD 182
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACAD8_DICDI (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14 Identity = 50/187 (26.74%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 154 DTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHS-IFIEKGMP 711 + Q QF+ FA+E + P A K D+ FP+DV + GI ++ I +E ++ A S H N+C + +G+ Q+ K+LP L+S E + + ++EP +GSD + KA + YI+NG+K + + G ++ +V +T + + S + +EK P Sbjct: 41 EDQKQFQSMALDFAQEKMKPFAEKWDKEEYFPRDV--MREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIH-NMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDTP 224
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13 Identity = 49/185 (26.49%), Postives = 87/185 (47.03%), Query Frame = 1 Query: 160 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKGM 708 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + R +EKGM Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SQMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCE---DGRIRGFLLEKGM 242
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 48/185 (25.95%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 160 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKGM 708 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + + +EKGM Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGCIR---GFLLEKGM 242
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 346 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAK 654 + IA EI+R S HS+L + + GS AQK+KYLP L V A++EP+ GSD G+ A +V+GG+ ING K W N A L+++A+ Sbjct: 118 NAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR 220
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 364 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKGM 708 E+ R S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD GM+ +A + + Y ++G K W TN PVA +V+A+ + +EKGM Sbjct: 129 ELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCEDNCIP---GFILEKGM 242
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 49/186 (26.34%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 160 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKD-KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKGM 708 ++ +++ + +E++ PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD M+ +A + + Y +NG K W TN PVA VV+A+ + + +EKGM Sbjct: 33 EILIRDTFRTYCQEHLMPRIVLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNCIR---GFLLEKGM 212 The following BLAST results are available for this feature:
BLAST of FC929962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929962 ID=FC929962; Name=FC929962; organism=Citrus clementina; type=EST; length=714bpback to top |