FC929967

Overview
NameFC929967
Unique NameFC929967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:214..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: INM1_YEAST (Inositol monophosphatase 1 OS=Saccharomyces cerevisiae GN=INM1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29
Identity = 81/208 (38.94%), Postives = 114/208 (54.81%), Query Frame = 3
Query:  114 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKG---QVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTE------LVKSLLATEAGTKRDKPTLDASTNRINSLLF----KVRSLRMSGSCALNL 698
            S+ KFL     A ++ G II++     K+ + K     VD+VT  DK  E LI+  +K Q+P  KFIGEE+    G T +TD+PT+I+DP+DGTTNFVH FPF C S+GLT+ K P+VGV+YNP ++ L +  +G G   N K     S+ E      L KS++A + G+ R+             LL      V   R  GS A+ +
Sbjct:    7 SIEKFLCEL--ATEKVGPIIKSKSGTQKDYDLKTGSRSVDIVTAIDKQVEKLIWESVKTQYPTFKFIGEESYVK-GETVITDDPTFIIDPIDGTTNFVHDFPFSCTSLGLTVNKEPVVGVIYNPHINLLVSASKGNGMRVNNKDYDYKSKLESMGSLILNKSVVALQPGSAREGKNFQTKMATYEKLLSCDYGFVHGFRNLGSSAMTM 211          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_HAEIN (Inositol-1-monophosphatase OS=Haemophilus influenzae GN=suhB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 78/194 (40.21%), Postives = 110/194 (56.70%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLC 701
            L+ A+ AA++AG +I   + +   +E   KG  D VT  DKA E  I   +++ +P H  I EET    GA E  D    WI+DPLDGT NF+ G P   +SI + +     VGVVY+PI +ELFT VRG+GA  N   ++V S+ E+  S+LAT    K+ K  + A    +N+L+      R +GS AL+LC
Sbjct:    5 LNIAIRAARKAGNVIAKNYERRDAIESTQKGINDYVTNVDKASEAEIIEVIRKSYPDHTIITEET----GAIEGKDSDVQWIIDPLDGTRNFMTGLPHFSVSIAVRVKNRTEVGVVYDPIRNELFTAVRGEGAKLNEVRLRVDSKREIQGSILATGFPFKQPK-LMPAQFAMMNALIEDAADFRRTGSAALDLC 193          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_PASMU (Inositol-1-monophosphatase OS=Pasteurella multocida GN=suhB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.891e-27
Identity = 72/194 (37.11%), Postives = 110/194 (56.70%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVEH--KGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLC 701
            L+ A+ AA++AG +I  G+ +  +++   K   D VT  DKA E+ I   +++ +P H  I EE+    GA E  D    W++DPLDGTTNFV G P   +SI + +     VGVVY+PI +ELFT VRG+GA  N   ++V ++ +L  ++L T    K+ +  +      +N+L+      R  GS AL+LC
Sbjct:    5 LNIAIRAARKAGNVIAKGYERRDDLQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEES----GALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDLAGTVLTTGFPFKQTR-LMPMQFAMMNNLIQDCADFRRMGSAALDLC 193          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: QUTG_EMENI (Protein qutG OS=Emericella nidulans GN=qutG PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.619e-26
Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 3
Query:  138 AVDAAKRAGEIIRNGFYQTKN----VEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATE--LTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFN 527
            A D A++AG+++        +     E +  VDLVT+TD+  E LI   ++ ++PAHKF+GEE+ A   + E  + ++PTW VDPLDGT NF H FP  C+SIG  +   P++GV+Y P++++LF+    +GA+ N
Sbjct:   17 ATDLARKAGQLLLERVNDRNSEQVYAEKENAVDLVTQTDEDVESLIKTAIQTKYPAHKFLGEESYAKGQSREYLIDEQPTWCVDPLDGTVNFTHAFPMFCVSIGFIVNHYPVIGVIYAPMLNQLFSSCLNRGAWLN 152          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_ECOLI (Inositol-1-monophosphatase OS=Escherichia coli (strain K12) GN=suhB PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25
Identity = 74/193 (38.34%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNL 698
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT  RGQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDL 192          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_ECOL6 (Inositol-1-monophosphatase OS=Escherichia coli O6 GN=suhB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25
Identity = 74/193 (38.34%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNL 698
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT  RGQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDL 192          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_ECO57 (Inositol-1-monophosphatase OS=Escherichia coli O157:H7 GN=suhB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25
Identity = 74/193 (38.34%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNL 698
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT  RGQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDL 192          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_RHILO (Inositol-1-monophosphatase OS=Rhizobium loti GN=suhB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25
Identity = 73/198 (36.87%), Postives = 108/198 (54.55%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKN--VEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTD-EPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTN-----RINSLLFKVRSLRMSGSCALNL 698
            L+  V AA +AG  +   F + +N  V  KG  D V++ D+  ED+IF  L +  P + F+ EE     GA E  D +  WIVDPLDGTTNF+HG P   +SI L      + GV+YNP MDEL+T  RG GAF N + ++V+ + +LV +++          P L    +      + +++ +V  +R  GS AL+L
Sbjct:    7 LNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEER----GAVEGEDSQHRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGC------GMPHLGRGHHGNFLVELRNVMAEVSGVRRLGSAALDL 194          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_SALTY (Inositol-1-monophosphatase OS=Salmonella typhimurium GN=suhB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNL 698
            L  AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  +   +  W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT  RGQGA  NG  ++ S+  +L  ++LAT    K  K       N I  L  +    R +GS AL+L
Sbjct:    5 LTIAVRAARKAGNVIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGEHVGTDQ---DVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIIGKLFTECADFRRTGSAALDL 192          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFA (Inositol-1-monophosphatase OS=Xylella fastidiosa GN=suhB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 3
Query:  141 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNL 698
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  CISI L     P   V+++P+ +ELFT  RG GA  N + I+V+++ +L  ++L T   + R++    A    +++LL +   +R SGS AL+L
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPEYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCISIALVENGEPTDAVIFDPLRNELFTASRGAGAILNERKIRVANRKDLNGTMLNT-GFSPRERSRAHAQLKCVDALLMQAEDIRRSGSAALDL 191          
The following BLAST results are available for this feature:
BLAST of FC929967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
INM1_YEAST2.530e-2938.94Inositol monophosphatase 1 OS=Saccharomyces cerevi... [more]
SUHB_HAEIN2.142e-2840.21Inositol-1-monophosphatase OS=Haemophilus influenz... [more]
SUHB_PASMU6.891e-2737.11Inositol-1-monophosphatase OS=Pasteurella multocid... [more]
QUTG_EMENI7.619e-2640.44Protein qutG OS=Emericella nidulans GN=qutG PE=3 S... [more]
SUHB_ECOLI1.697e-2538.34Inositol-1-monophosphatase OS=Escherichia coli (st... [more]
SUHB_ECOL61.697e-2538.34Inositol-1-monophosphatase OS=Escherichia coli O6 ... [more]
SUHB_ECO571.697e-2538.34Inositol-1-monophosphatase OS=Escherichia coli O15... [more]
SUHB_RHILO2.895e-2536.87Inositol-1-monophosphatase OS=Rhizobium loti GN=su... [more]
SUHB_SALTY3.781e-2537.50Inositol-1-monophosphatase OS=Salmonella typhimuri... [more]
SUHB_XYLFA6.450e-2533.51Inositol-1-monophosphatase OS=Xylella fastidiosa G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34002D03EF PostHarvC1 Citrus clementina cDNA clone C34002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929967 ID=FC929967; Name=FC929967; organism=Citrus clementina; type=EST; length=731bp
GGTCATTACCACCATCATCACTCATCAGCTCGCTGTCCCTTCTCTTCTCG
TTCTTCTCTTTAACTTTTTAATCCCGTATAATAAAAAATTCTACCCATAT
GGCACAAAATGATTCGCTTGCAAAGTTCTTGGACACTGCAGTTGATGCAG
CTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAAT
GTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCATG
TGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCGCGCATAAGT
TCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACTGAT
GAACCCACTTGGATTGTTGATCCTCTTGATGGAACAACTAACTTTGTGCA
TGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATTC
CTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGGA
GTCCGTGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCATC
TCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAAC
GTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCTA
TTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTTG
TGGAATGCATGCGNAAGGCTTGATCTGTTTT
back to top