FC929967

Overview
NameFC929967
Unique NameFC929967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:214..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_BACSU (Inositol-1-monophosphatase OS=Bacillus subtilis GN=suhB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 58/188 (30.85%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  153 KRAGEIIRNGFYQTKNVEHKGQV-DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHA 713
            + AG  I    +++  +E K    DLVT  DK  E    + +++ FP H+ +GEE           +   WI+DP+DGT NFVH      ISIG+       +G++Y+ + DEL+    G+GA+ N   +    +T + +++LA  A    +   +D S   +  L+ +VR  R  GS AL L  + A
Sbjct:   16 REAGARITQSMHESLTIETKSNPNDLVTNIDKETEKFFIDRIQETFPGHRILGEEGQG--DKIHSLEGVVWIIDPIDGTMNFVHQQRNFAISIGIFENGEGKIGLIYDVVHDELYHAFSGRGAYMNETKLAPLKETVIEEAILAINATWVTENRRIDQSV--LAPLVKRVRGTRSYGSAALELANVAA 199          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: Y733_CHLP8 (Uncharacterized protein Cpar_0733 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0733 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16
Identity = 59/193 (30.57%), Postives = 94/193 (48.70%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGF-YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPT-----WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTE-LVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSC 686
            L  A++ A++AG++  + F  ++  V  K     VTE D+  E+LI   +  +FP     GEE           + P+     WI+DP+DGT +F+HG P   + I L +     +GV+  P + EL+   RG GAF NG P++VS+  E    +++ TE     D P    S + ++ L      +R  G C
Sbjct:    5 LQLALELAEKAGKLTLDYFGRRSLQVFSKRDDTPVTEADRNAEELIRQGISAKFPDDGLFGEE---------FDEHPSGNGRRWIIDPIDGTRSFIHGVPLYGVMIALEVEGAMQLGVINFPALGELYQAERGSGAFMNGSPVQVSAIAENSASTVVFTEKEYLLDPP----SNHPVDQLRIDAGLVRGWGDC 184          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: IMPL2_ARATH (Phosphatase IMPL2, chloroplastic OS=Arabidopsis thaliana GN=IMPL2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  108 NDSLAKFLDTAVDA--------AKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLAT 584
            N+S ++  DT +D         A  +GE+IR  F +  ++  K  +  VT  D+  E+ + + + Q  P+H   GEE    C   E + +  W++DP+DGT +F+ G P     I L     PI+G++  PI+ E + G+ G+    NG+ I   S  +L ++ L T
Sbjct:   72 NESPSELSDTELDRFAAVGNALADASGEVIRKYFRKKFDIVDKDDMSPVTIADQMAEEAMVSIIFQNLPSHAIYGEEKGWRC--KEESADYVWVLDPIDGTKSFITGKPVFGTLIALLYKGKPILGLIDQPILKERWIGMNGRRTKLNGEDISTRSCPKLSQAYLYT 236          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_BUCBP (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=suhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVEHKGQV---DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLL 578
            L+ A+  A++ G I+   +Y      ++ Q+   D +T+     E  + + + + +P H  I   T           E  W+++ LDG  NF +  P  CISI + + K   + V+Y+PI +ELFT V+GQG+  NG  ++  S   L +SL+
Sbjct:    5 LNIAIRVARKCGNILIQ-YYDRNKTNNEKQILKKDFITKIIFVLEKTMIDMIHKSYPEHSII---TYHKNNKIFKNTEIIWLINALDGIKNFENNLPHFCISIAIIVRKTTQISVIYDPIRNELFTSVKGQGSQLNGYRMRCKSTNTLKRSLV 153          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_MYCTU (Inositol-1-monophosphatase OS=Mycobacterium tuberculosis GN=suhB PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 55/175 (31.43%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  222 DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATEL-TDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGK----PIKVSSQTELVKSLLATEAGTK---RDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGL 722
            D VT  D   E L+ + L Q  P    +GEE       T   +D  TW++DP+DGT NFV+G P   +SIG  +G I + G V +     +++   G GA    +     ++ +   EL  +LL T  G     R+K         +  ++  VR +R  GS AL+LC + A  L
Sbjct:   54 DPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCREK-----QAELLAHVVPLVRDVRRIGSAALDLCMVAAGRL 223          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_MYCBO (Inositol-1-monophosphatase OS=Mycobacterium bovis GN=suhB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 55/175 (31.43%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  222 DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATEL-TDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGK----PIKVSSQTELVKSLLATEAGTK---RDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGL 722
            D VT  D   E L+ + L Q  P    +GEE       T   +D  TW++DP+DGT NFV+G P   +SIG  +G I + G V +     +++   G GA    +     ++ +   EL  +LL T  G     R+K         +  ++  VR +R  GS AL+LC + A  L
Sbjct:   54 DPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCREK-----QAELLAHVVPLVRDVRRIGSAALDLCMVAAGRL 223          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_BUCAI (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=suhB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 55/206 (26.70%), Postives = 96/206 (46.60%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVEH---KGQV---DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGLIC 728
            L+ A+ A ++ G  I   + + K V+    K +V   +++ +T+K   ++I     + +P H  + +         E      WI+  LDG TNF+  FP+ C+SI + +     + V+Y+PI ++LFT V+GQG+  NG   + S+   L  S +A     K    T  +       L+    S R +GS  L+   + A  + C
Sbjct:    5 LNIAIRAVRKGGNFIIQNYERRKFVKEDVEKNKVFLNNIIYKTNKIISEIIH----KSYPYHTILKKHENILVKKNE--KNTVWIITELDGKTNFLKYFPYFCVSIAVVVKNKTEISVIYDPIKNDLFTAVKGQGSQLNGYRTRCSAINTLNYSTVAVNPSNKIHNLT-SSYFEIYKKLIISGISFRCTGSSILDSAYVAAGKIDC 203          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_MYCLE (Inositol-1-monophosphatase OS=Mycobacterium leprae GN=suhB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = 3
Query:  222 DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEP----TWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAF----FNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGL 722
            D VT  D   E L+ + L Q  P    +GEE     G  +LT  P    TW++DP+DGT NFV+G P   +S+   +  + + G V   +   + +   G GA     +  + ++ S+  +L  +LL T  G         A    +  +L  VR +R  GS AL+LC + A  L
Sbjct:   54 DPVTVVDTETERLLRDRLAQLRPGDSILGEE---GGGPADLTATPADTVTWVLDPIDGTVNFVYGIPAYAVSVAAQVDGVSVAGAVAEVVAGRVHSAASGLGAHVTDEYGVQVLRCSAVDDLSMALLGT--GFAYSVVRRAAQAALLAQMLPVVRDVRRIGSAALDLCMVAAGQL 223          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: SUHB_BUCAP (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=suhB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 54/206 (26.21%), Postives = 99/206 (48.06%), Query Frame = 3
Query:  129 LDTAVDAAKRAGEIIRNGFYQTKNVEH---KGQV---DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGMHAXGLIC 728
            L+ A+ A ++ G II   +   K ++    K ++   +++ +T +   ++I+    + +P H  + + T       +      WI++ LDG  NF+  FP  CISI + +     + V+Y+PI ++LFT V+GQG+  NG  I+ ++   L  S +A     K    +L         L+    SLR +GS  L+L  + +  + C
Sbjct:    5 LNIAIRAIRKGGNIIVQNYDTQKFIKEDLDKKKIFIKNIMYKTYRIISEVIY----KSYPNHIILNKNTDLI----KNEKNTLWIINELDGKNNFIKNFPHFCISIAVIMKNNTEISVIYDPIRNDLFTAVKGQGSQLNGYRIRCNNINSLNYSTIAINLPLKHYAKSL-FYLKIYKKLILSGISLRCTGSTLLDLAYVASGRIDC 201          
BLAST of FC929967 vs. ExPASy Swiss-Prot
Match: Y4FL_RHISN (Uncharacterized protein y4fL OS=Rhizobium sp. (strain NGR234) GN=NGR_a03700 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 3
Query:  129 LDTAVDAAKR------AGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDEL 491
            LDT +D  +       A  + R G      +E KG+ D V+  D+  E L    +  QFPA   +GEE     G  E+     W++DP+DGT NF+ G P   +SI     K P++G V  P +D L
Sbjct:    5 LDTRLDLLRNITSKVGAFALARFGNLSHIVIETKGEADYVSAADRDAESLARRLIHAQFPADAIVGEEQL---GDAEVDH---WLIDPIDGTANFLSGIPLWAVSIAFVRNKEPVLGAVALPALDTL 125          
The following BLAST results are available for this feature:
BLAST of FC929967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
SUHB_BACSU9.021e-1930.85Inositol-1-monophosphatase OS=Bacillus subtilis GN... [more]
Y733_CHLP85.473e-1630.57Uncharacterized protein Cpar_0733 OS=Chlorobaculum... [more]
IMPL2_ARATH1.761e-1429.94Phosphatase IMPL2, chloroplastic OS=Arabidopsis th... [more]
SUHB_BUCBP6.690e-1429.41Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]
SUHB_MYCTU1.947e-1331.43Inositol-1-monophosphatase OS=Mycobacterium tuberc... [more]
SUHB_MYCBO1.947e-1331.43Inositol-1-monophosphatase OS=Mycobacterium bovis ... [more]
SUHB_BUCAI1.947e-1326.70Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]
SUHB_MYCLE1.648e-1230.29Inositol-1-monophosphatase OS=Mycobacterium leprae... [more]
SUHB_BUCAP2.152e-1226.21Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]
Y4FL_RHISN3.108e-1133.86Uncharacterized protein y4fL OS=Rhizobium sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionC34002D03EF PostHarvC1 Citrus clementina cDNA clone C34002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929967 ID=FC929967; Name=FC929967; organism=Citrus clementina; type=EST; length=731bp
GGTCATTACCACCATCATCACTCATCAGCTCGCTGTCCCTTCTCTTCTCG
TTCTTCTCTTTAACTTTTTAATCCCGTATAATAAAAAATTCTACCCATAT
GGCACAAAATGATTCGCTTGCAAAGTTCTTGGACACTGCAGTTGATGCAG
CTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAAT
GTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCATG
TGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCGCGCATAAGT
TCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACTGAT
GAACCCACTTGGATTGTTGATCCTCTTGATGGAACAACTAACTTTGTGCA
TGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATTC
CTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGGA
GTCCGTGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCATC
TCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAAC
GTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCTA
TTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTTG
TGGAATGCATGCGNAAGGCTTGATCTGTTTT
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