FC929975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: GBLP_MEDSA (Guanine nucleotide-binding protein subunit beta-like protein OS=Medicago sativa GN=GB1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11 Identity = 50/184 (27.17%), Postives = 88/184 (47.83%), Query Frame = 2 Query: 56 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSI---PRPEGLKPTDKSSSKK--FVLSVAWSPDGRRIACGSMDGTISVFDVTR 592 +AH + V V + P+T +++ S D TVK+W + +L T GH V +VA P G + AS D + ++D+ + +L+A S + + F P L A +S+K+WD + +++ L + + D ++ KK + S+ WS DG + G DG + V+ + R Sbjct: 146 DAHSDWVSCVRFSPSTPQ--PTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GSIIHALCFSPNRYWLCAA--TESSIKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGR 324
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPNQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPNQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PFS2_ASPOR (Polyadenylation factor subunit 2 OS=Aspergillus oryzae GN=pfs2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 60/224 (26.79%), Postives = 97/224 (43.30%), Query Frame = 2 Query: 44 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDP-KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRI-ACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 709 ++V +AH + + A A L++G +K WRP+ +E + H V +A PS SAS D+ +++FD + + L +V + P KG L V+G VK WD T + TL S K V + +S + + A S D T VFD+ + + L GH PV SL + P+ ++ + S+D ++ Y Sbjct: 133 ETVMDAHYDQLQAGVTSLAWSHSHDWLISGGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIFDFTSRTADTVLTGHNWDVKSCDWHPTKG--LLVSGSKDHQVKFWDPRTARCLTTLH-------------SHKNTVTATRFSRVNQNLLATSSRDQTARVFDLRMMRDICILRGHEKPVSSLTWHPIHSSLISTGSEDGSLYHY 341
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: FBXW7_MOUSE (F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 56/217 (25.81%), Postives = 98/217 (45.16%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 H VW+ ++ R ++++GS D T+K+W + + T GH V + H ++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD T + TL T++ S +F DG + GS+D +I V+DV +H L GH + + +L S + D+ V ++D Sbjct: 342 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR---RVVSGAYDFMVKVWDPETETCLHTLQ-------GHTNRVYSLQF--------DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---ELKDNILVSGNADSTVKIWD 529
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: FBXW7_HUMAN (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 56/217 (25.81%), Postives = 98/217 (45.16%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 H VW+ ++ R ++++GS D T+K+W + + T GH V + H ++ S S D+ +RV+D++T + L + V +Q+D + V+G VK+WD T + TL T++ S +F DG + GS+D +I V+DV +H L GH + + +L S + D+ V ++D Sbjct: 420 HTGGVWS------SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR---RVVSGAYDFMVKVWDPETETCLHTLQ-------GHTNRVYSLQF--------DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---ELKDNILVSGNADSTVKIWD 607
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 2 Query: 167 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 +D LER GH + S+ P+G A+AS D+F+ +++ +A V +QF P G LA A +V+LW IP G K ++ + V SV +S DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + ++D Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASA-SRDRTVRLW------------IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWD 172
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 2 Query: 167 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 +D LER GH + S+ P+G A+AS D+F+ +++ +A V +QF P G LA A +V+LW IP G K ++ + V SV +S DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + ++D Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASA-SRDRTVRLW------------IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWD 172
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 57/211 (27.01%), Postives = 90/211 (42.65%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H+++V V + P+ LL +GS D+TV++W P+ H V SV G +AS D V+V+ + +L + V +F P G L V+ +VKLWD + + + FV V + P G IA MD T+ V+DV + L H + H V +L + P ++ ++SD T Sbjct: 60 HKDAVTCVNFSPSGH----LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC-------------EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDST 252
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPNQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420 The following BLAST results are available for this feature:
BLAST of FC929975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929975 ID=FC929975; Name=FC929975; organism=Citrus clementina; type=EST; length=713bpback to top |