FC929975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPNQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 56/175 (32.00%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 188 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 T H V +A HP+ + ASAS D+ V+++D + TL+ V + FDP+G +A ++KLWDTA + L D S V SV + PDG + S D TI V+ V+ + GH VR V S D R L SAS+D ++D Sbjct: 100 TLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATC-SSDLTLKLWDTAN-------QYTNVKTLHGHDHS-----VSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSE-DGRWLVSASNDQTSRIWD 260 HSP 2 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 51/182 (28.02%), Postives = 83/182 (45.60%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 661 LL + S D TVKLW + +ERT GH V+ V P G + A+ S D ++++D + ++ TL V ++F P G TL V+ ++++W ++ I T S ++V S DGR + S D T ++D + + L GH V V++PV+ Sbjct: 119 LLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETL-VSASRDKTIRVWQVSSGYCIKTF-------------SGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVN 286
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 580 P L++GS D T+ LW P +D + TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWDVKAQKLA-------------TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: GBLP_CHLRE (Guanine nucleotide-binding protein subunit beta-like protein OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 586 H E V V + P T T P ++++G D+ VK+W + +L+ GH V +V P G + AS D ++D+ + +L+A + + F P L A +S+K+WD + +++ L RPE T K + + +S+AWS DG + G DG I V+ V Sbjct: 149 HTEWVSCVRFSPMT-TNP-IIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGIAMLWDLAEGKRLYSLDA-GDVIHCLCFSPNRYWLCAA--TQSSIKIWDLESKSIVDDL---RPE-FNITSKKAQVPYCVSLAWSADGSTLYSGYTDGQIRVWAV 314
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: GBLP_ARATH (Guanine nucleotide-binding protein subunit beta-like protein OS=Arabidopsis thaliana GN=ARCA PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 592 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA S + + F P L A +K+WD + +++ L + + D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA--TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 52/199 (26.13%), Postives = 94/199 (47.24%), Query Frame = 2 Query: 122 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV--YSPVDPRVLFSASDDTHVHMYD 712 L++ S D+T+K+W + +T GH V +P + S S D V++++V T + TL A + + F+ G +L V+G ++WD A+ + TL+ EG P V V +SP+G+ I ++D T+ ++D +R + L GH L +S + + S S+D V++++ Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNG-SLIVSGSYDGLCRIWDAASGQCLRTLA---DEGNPP---------VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 281
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 58/220 (26.36%), Postives = 89/220 (40.45%), Query Frame = 2 Query: 122 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP---------RPEG-----------LKPTDKSSSK---------KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 L +GS+D T+ +W TGH V V PSG + AS S D VR++ + A + V + F G +L V +VK+W T + +L+ P+G +K DK+S + FV V + P G IA MD T+ V+D + L H + H V +L + P ++ ++SD T Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDST 252 HSP 2 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 55/218 (25.23%), Postives = 93/218 (42.66%), Query Frame = 2 Query: 38 GLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 691 G +V AH +V +V + ++ L+T S D+TVK+W + + T H V P G + SAS D V+++D + I + V + F P GT +A AG + +VK+WD T L+ + V ++++ P G + S D T+ + D+ + L+ L GH P ++ +S SD+ Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQS----LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDARTHRLLQHYQL-------------HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 293
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: WD51A_HUMAN (WD repeat-containing protein 51A OS=Homo sapiens GN=WDR51A PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 57/211 (27.01%), Postives = 90/211 (42.65%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H+++V V + P+ LL +GS D+TV++W P+ H V SV G +AS D V+V+ + +L + V +F P G L V+ +VKLWD ++ + + FV V + P G IA MD T+ V+DV + L H + H V L + P ++ ++SD T Sbjct: 60 HKDAVTCVNFSPSGH----LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYC-------------EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDST 252
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PHIP_MOUSE (PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDP-----KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H SV+ VT+ + + TGS D VK+W DD +L T GH + +A + + A+ S D +RV+ + T A +A L+ + + +QF P K + G+ LWD T + P K T++ ++ ++S G +A GS D I V F + + + LE H V S+ +S R + + D T Sbjct: 182 HLSSVYCVTF----DRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKI-------NPRPTKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGT 388
BLAST of FC929975 vs. ExPASy Swiss-Prot
Match: PHIP_HUMAN (PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDP-----KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H SV+ VT+ + + TGS D VK+W DD +L T GH + +A + + A+ S D +RV+ + T A +A L+ + + +QF P K + G+ LWD T + P K T++ ++ ++S G +A GS D I V F + + + LE H V S+ +S R + + D T Sbjct: 182 HLSSVYCVTF----DRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKI-------NPRPAKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGT 388 The following BLAST results are available for this feature:
BLAST of FC929975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929975 ID=FC929975; Name=FC929975; organism=Citrus clementina; type=EST; length=713bpback to top |