FC929981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACDSB_DICDI (Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14 Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 143 TSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADR-VDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 T+L ++T L KE+V FA E + P +D+++ + L K + + NL GI IA+EE+++ ++ + + L N + R+GS Q++KYL +++ VG+ +SE +GSD + +A R DG +++NG K W TN A +V A D Sbjct: 33 TTLSEEETLL--KETVANFANEKVRPLVKVMDETSELNK--GLLKDLFDMNLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYL-SMLATNTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMANVD 203
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACDP_MYCTU (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis GN=fadE25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 2 Query: 173 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTD 182
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 173 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 + + ++ A + IAP AA +DQ FP++ FN I P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD Sbjct: 21 ELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFN--AIHVPEEYGGQGADSVAACIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTD 182
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACDP_MYCBO (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis GN=fadE25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 2 Query: 173 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTD 182
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 353 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAK 661 + IA EI+R S HS+L + + GS AQK+KYLP L V A++EP+ GSD G+ A +V+GG+ ING K W N A L+++A+ Sbjct: 118 NAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR 220
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: ACAD8_DICDI (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 161 DTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 664 + Q QF+ FA+E + P A K D+ FP+DV + GI ++ I +E ++ A S H N+C + +G+ Q+ K+LP L+S E + + ++EP +GSD + KA + YI+NG+K + + G ++ +V +T Sbjct: 41 EDQKQFQSMALDFAQEKMKPFAEKWDKEEYFPRDV--MREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIH-NMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRT 205
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 44/169 (26.04%), Postives = 82/169 (48.52%), Query Frame = 2 Query: 167 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCE 229
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 44/169 (26.04%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 167 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SQMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCE 229
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 371 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 E+ R S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD GM+ +A + + Y ++G K W TN PVA +V+A+ + Sbjct: 129 ELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCE 229
BLAST of FC929981 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 45/170 (26.47%), Postives = 82/170 (48.24%), Query Frame = 2 Query: 167 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKD-KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 667 ++ +++ + +E++ PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD M+ +A + + Y +NG K W TN PVA VV+A+ + Sbjct: 33 EILIRDTFRTYCQEHLMPRIVLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCE 199 The following BLAST results are available for this feature:
BLAST of FC929981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929981 ID=FC929981; Name=FC929981; organism=Citrus clementina; type=EST; length=676bpback to top |