FC929982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_LISIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria innocua GN=gpmI PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 67/172 (38.95%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661 VA+++LDG+G+ N + A+ P D + + P ++A G VGLP E MGNSEVGH +GAGRI Q +D A+ G+ +++ N + LHL GLLSDGGV S ++ L LL+ A ++G K + +H DGRDV SS+ ++ET+EK +++L Sbjct: 6 VAIIILDGFGKRAETVGNAVAQANKPNFDRYWANFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLEKAISDL 174
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_PROM1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain NATL1A) GN=gpmI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGV 676 V + +LDGWG + ++N + A TP +D+ + P L+ A G+ VGLP E MGNSEVGH +GAGRI Q + + K+ + N S + G TLH++GL SDGGV S ++ L L++ A+ +G K + LH+ TDGRD S+ ++ TIE A+++ GV Sbjct: 18 VVLAILDGWGYREEIEHNAVRQASTPVIDALWHAYPHT--LIEASGADVGLPDEQ-MGNSEVGHLTIGAGRIIQQELVRISNTVKENKLITNPALNQFSQSLKKGGGTLHIMGLCSDGGVHSHINHLCGLIEWAASKGLKSVSLHLFTDGRDTSAKSANKYINTIE---AKIKSTGV 188
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_LISMF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gpmI PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26 Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661 VA+++LDG+G+ N + A+ P D + + P ++A G VGLP E MGNSEVGH +GAGRI Q +D A+ G+ +++ N + LHL GLLSDGGV S ++ L LL+ A ++G K + +H DGRDV SS+ ++ET++K +++L Sbjct: 6 VAIIILDGFGKRAETVGNAVAQANKPNFDRYWANFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAISDL 174
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_LISMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmI PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 66/172 (38.37%), Postives = 99/172 (57.56%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661 VA+++LDG+G+ N + A+ P D + P ++A G VGLP E MGNSEVGH +GAGRI Q +D A+ G+ +++ N + LHL GLLSDGGV S ++ L LL+ A ++G K + +H DGRDV SS+ ++ET++K +++L Sbjct: 6 VAIIILDGFGKRAETVGNAVAQANKPNFDRYWADFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAISDL 174
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_SILST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter sp. (strain TM1040) GN=gpmI PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26 Identity = 68/170 (40.00%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-YIKPSFET-GTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLA 655 V + +LDGWG +P N ++A TPT+D+ +S P RLV HG VGLP+ MGNSEVGH +GAGR+ A +DLA+ G Y ++ +I ET G HL+GL+SDGGV + + +K + G + LH +TDGRDV S++ +++ +E +A Sbjct: 7 VVLCILDGWGSAEPGPANAPYLAKTPTLDAIMQSCPTA-RLV-THGPDVGLPS-GQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFYDNDALQAFIAKLKETGGAAHLMGLVSDGGVHGHVTHILAAIKAIRDAGVP-VWLHAITDGRDVAPKSALTYLDQLEAGMA 172
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_LISW6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gpmI PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661 VA+++LDG+G+ N + A+ P D + P ++A G VGLP E MGNSEVGH +GAGRI Q +D A+ G+ +++ N + LHL GLLSDGGV S ++ L LL+ A ++G K + +H DGRDV SS+ ++ET++K + +L Sbjct: 6 VAIIILDGFGKRAETVGNAVAQANKPNFDRYWADFPHGE--LKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAMNDL 174
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_CLOD6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium difficile (strain 630) GN=gpmI PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 61/170 (35.88%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661 VA++++DG+G K K N I + TP +D KK P L+ A G VGLP + MGNSEVGH +GAGRI Q + ++ G + ++ + + +LH++GLLSDGGV S +D L+ ++K A ++G +++ +H TDGRD S++ + + ++ + E+ Sbjct: 6 VALIIMDGFGYNKDVKGNAIAESKTPNLDRIKKEYPNT--LINASGLDVGLP-DGQMGNSEVGHTNIGAGRIVYQDLTRITKSIKDGDFFTNKVLCEAMDNAKENSLHVMGLLSDGGVHSHIDHLKAIIKMAKDKGVQKVYVHAFTDGRDTDPQSALEYAKEVQASMDEI 172
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_PROM3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain MIT 9303) GN=gpmI PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 65/166 (39.16%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIE 643 V + +LDGWG + ++N I A+TP MD+ + P L+ A G+AVGLP ++ MGNSEVGH +GAGR+ Q + + +G++ Q + GTLHL+GL SDGGV S ++ L LL A+ G ++ LH++TDGRD S+ ++ IE Sbjct: 18 VVLAILDGWGHREELEHNSIRSAETPIMDALWHAYPHT--LIEASGAAVGLP-DNQMGNSEVGHLTIGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLITDGRDTPTQSASNYLHQIE 180
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_CHLAD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gpmI PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 71/190 (37.37%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 134 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIA 691 ++R V ++++DGWG P N +ADTP +D + + P + + A G VGLP E +GNSEVGH +GAG I Q + A+A G + + F ++K LHL+GL GGV + D L LL+ A + +R+ LH+ DGRDVL S++GF++T+E +A L G GV A ++ Sbjct: 1 MTRPRPVVLIIMDGWGVAPPGPGNAADLADTPHVDEWMATCP--FTTLGASGLDVGLP-EGQIGNSEVGHLNIGAGFIVYQELTRISKAIADGDFFTNPAFLQAIEHVKQ--HNSALHLMGLFGPGGVHAHEDHLHALLELAHRQQVRRVYLHLFLDGRDVLPRSALGFLDTLEGVIARL-GVGVIATVS 184
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_PROMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus GN=gpmI PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 2 Query: 152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKG 673 V + +LDGWG + + N I+ ADTP MD+ ++ P L+ A G+ VGLP ++ MGNSEVGH +GAGRI Q + + S K+ Q N ET TLHL+GL SDGGV S ++ L LL+ A +G +++ +H TDGRD SS+ +++ I K+ E+ G G Sbjct: 18 VVLTILDGWGHREENINNAINNADTPVMDALWQAYPHT--LIEASGADVGLP-DNQMGNSEVGHLTIGAGRIIQQELVRISNTIRSKKLDQITNLSNLANKLIETDKTLHLVGLCSDGGVHSHINHLCGLLEWAKNKGIQKVAVHAFTDGRDTPAKSSLQYLKII-KEKFEVLGIG 189 The following BLAST results are available for this feature:
BLAST of FC929982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 274
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929982 ID=FC929982; Name=FC929982; organism=Citrus clementina; type=EST; length=710bpback to top |