FC929982

Overview
NameFC929982
Unique NameFC929982
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_SYNP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 65/168 (38.69%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT----LHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIE 643
            V +V+LDGWG  +    N I  A+TP +D+F  + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    +  A+  G   +++    +K   ET      LHLIGL SDGGV S L+ L  LL  A   G   + +H +TDGRD      + +++ I+
Sbjct:    9 VVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPST--LIHTSGKRVGLP-DGQMGNSEVGHLNLGAGRVVPQELVRISDAIEDGSFLRNDVL--VKVCRETRQAGKKLHLIGLCSDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNTTEGINYLQQIQ 171          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_PORYE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra yezoensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIK-------PSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETI 640
            + + +LDGWG     + N I +A TPT+DS  ++ P    L+ A G  VGLP +  MGNSEVGH  +G GR+  Q     +L      I  +  FN ++        +    +LHLIGL S+GGV S +D L  L+  A  +    + LH++TDGRD    S+  F++ +
Sbjct:    9 IVLAILDGWGHTNIQQGNAIKIAKTPTIDSLIQAYPST--LLAASGQEVGLP-KGQMGNSEVGHTTIGGGRVIQQ-----ELVKIGNSIVDNSFFNNLELNEACEYANNNKASLHLIGLCSNGGVHSHIDHLLALIDLADSKQVTNLYLHLITDGRDTSSNSAKYFIKIV 170          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mycoides subsp. mycoides SC GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 66/174 (37.93%), Postives = 94/174 (54.02%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEG----FNYIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661
            V + +LDGWG  +PDK N +  A+   ++  KK+ P  W    A G  VGLP E+ MGNSEVGH  LGAGRI  +    ++    +  I +++     F Y+K +     LHL+GL S+GGV S  D +  + K A + G   I+  ++TDGRD     +  F+    KDL EL
Sbjct:    7 VLLAILDGWGISEPDKGNAVDNANMVFVEYLKKTYP--WLKAHASGKWVGLP-ENQMGNSEVGHIHLGAGRINLESLAKLNHETKTNNIAKNDEIVKTFEYVKKN--NSALHLMGLFSNGGVHSHFDHMIAIYKAAIDYGITNIKFDLITDGRDTKPKLAYDFI----KDLLEL 171          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_MOOTA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Moorella thermoacetica (strain ATCC 39073) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 69/182 (37.91%), Postives = 94/182 (51.65%), Query Frame = 2
Query:  143 NNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDA 682
            N  + +++LDG+G     + N I     P         P     +RA G AVGLP    MGNSEVGH  +GAGRI  Q    +  A+  G  + +      ++ + E G  LHL+GL+SDGGV S LD L  LL  A   G +R+ +H   DGRDV   S+ G++E +E    E R KG+ A
Sbjct:    6 NRPLMLMILDGFGLGPEGEGNAISQGRLPNYRRLLAGYPHT--RLRASGEAVGLPA-GQMGNSEVGHLNIGAGRIVYQELTRISKAIRDGSFFSNAALVGAVRAAREHGGALHLMGLVSDGGVHSHLDHLYALLDLAKREGLERVYIHAFLDGRDVPPASAAGYLEQVED---ECRQKGIGA 181          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_CLONN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium novyi (strain NT) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL 661
            V + +LDG G       N   +A  P +D   K  P    ++ A G +VGLP +  MGNSEVGH  +GAGRI  Q    +  ++  G I+++E       + +     +H +GLLSDGGV S +D L+ L+  A++ G K++ +H   DGRD    S++ ++E +EK +AE+
Sbjct:    6 VMLAILDGLGLSDHKDGNAFSLAKKPNLDKIFKEYPHT--VLGASGLSVGLP-DGQMGNSEVGHLNIGAGRIVYQALTRITKSIEDGDIFKNEALLKAIDNAKNNDSAIHFMGLLSDGGVHSHIDHLKGLIDFAAKSGVKKVYVHAFLDGRDTAPKSALTYIEDLEKHMAEV 174          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_ANAVT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 63/166 (37.95%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIE 643
            V +V+LDGWG  +  + N I  A TP M+S   + P    L+   G AVGLP E  MGNSEVGH  +GAGR+  Q    +  A+  G I  +     I        G LHL+GL S+GGV S +  L  LL  A E+    + +H +TDGRD      +  +  +E
Sbjct:    9 VVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHT--LIHTSGKAVGLP-EGQMGNSEVGHLNIGAGRVVPQELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLCSEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAPTDGINAISALE 171          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_ANASP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anabaena sp. (strain PCC 7120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 63/166 (37.95%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIE 643
            V +V+LDGWG  +  + N I  A TP M+S   + P    L+   G AVGLP E  MGNSEVGH  +GAGR+  Q    +  A+  G I  +     I        G LHL+GL S+GGV S +  L  LL  A E+    + +H +TDGRD      +  +  +E
Sbjct:    9 VVLVILDGWGYCEETRGNAIAAAKTPVMESLWTAYPHT--LIHTSGKAVGLP-EGQMGNSEVGHLNIGAGRVVPQELVRISDAVEDGSILSNSALVKICQEVRNRNGKLHLVGLCSEGGVHSHITHLFGLLDLAKEQRISEVCIHAITDGRDTAPTDGINAISALE 171          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.090e-21
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-YIKPSFETG-TLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKG 673
            + +++LDG+G     ++N I  A+ P  D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++      +  +   G  +H++GLLSDGGV S  D L  + K A++RGA++I LH   DGRD    S+   +E ++   A+L GKG
Sbjct:    8 LVLIILDGFGHSDIPEHNAIFAANKPVYDRLCATQPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVLTGAVDKAVGAGKAVHILGLLSDGGVHSHQDHLVAMAKLAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG 179          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.090e-21
Identity = 70/177 (39.55%), Postives = 95/177 (53.67%), Query Frame = 2
Query:  134 LSRNNIVAVVVLDGWGEYK--PD---KYNCIHV-ADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEK 646
            +S    V +V+ DGWG     PD   +Y    V ADTP  D    + P    L+ A G  VGLP +  MGNSEVGH  LGAGR+  Q    VD A+  G + ++           +  LHL+GL+SDGGV S ++ L  ++K A E G + I +H +TDGRD    S VGF+  +E+
Sbjct:    1 MSSKKPVVLVIRDGWGRNPLGPDVAKEYGDATVLADTPFTDYLLANYPHS--LLGASGEDVGLP-DGQMGNSEVGHLNLGAGRVVFQDLCRVDNAIKDGSMGENAVLKTAFSQAASSRLHLLGLVSDGGVHSHINHLIGIVKYAYEAGVRDICIHAITDGRDCSPTSGVGFIRQLEE 174          
BLAST of FC929982 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 62/169 (36.69%), Postives = 93/169 (55.03%), Query Frame = 2
Query:  152 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYI-KPSFETGTLHLIGLLSDGGVRSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDL 652
            V + +LDGWG     + N + +A+TPT D    + P    +   HG  VGLP    MGNSEVGH  +GAGR+ A     +DLA+  G   ++    ++I K   + GT HL+G++SDGGV   +  L   ++  +  G   + +H +TDGRDV   S+ GFV+ + + L
Sbjct:    7 VVLCILDGWGLRAEREANAVALANTPTFDRLMATCPNATLIT--HGPDVGLP-RGQMGNSEVGHTNIGAGRVVAMDLGAIDLAIEEGTFARNPALCDFIAKVKAKGGTAHLMGVVSDGGVHGHIQHLIAAVEVIAASGVP-VVIHAITDGRDVAPTSAGGFVQQLAEAL 171          
The following BLAST results are available for this feature:
BLAST of FC929982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
GPMI_SYNP28.347e-2238.692,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PORYE8.347e-2235.882,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCMS8.347e-2237.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MOOTA8.347e-2237.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLONN8.347e-2235.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAVT8.347e-2237.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANASP8.347e-2237.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEP11.090e-2136.932,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM81.090e-2139.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS51.424e-2136.692,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC34002E06EF PostHarvC1 Citrus clementina cDNA clone C34002E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929982 ID=FC929982; Name=FC929982; organism=Citrus clementina; type=EST; length=710bp
GGTCCTGGTATTCTCTCTCTGTGTAATATCACTTGTTTGTTTGTTAGCTT
TCTACGGACGCGCGATTCGCCTTCAATCCAAAACTAATTAAGAGTGAAAG
ATGGATAACTGGAAATTAAAAGAGCATCCACAGCTGTCGAGGAATAACAT
TGTAGCCGTTGTGGTGCTGGATGGCTGGGGTGAGTACAAGCCCGACAAGT
ATAACTGCATCCATGTCGCCGACACTCCCACCATGGACTCTTTCAAGAAG
TCTGCACCTGAGAGGTGGAGGTTGGTCCGAGCTCATGGTAGTGCTGTGGG
GCTTCCAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCAC
TCGGTGCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCT
CTGGCCTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCC
GTCTTTTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTG
GAGTACGCTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGT
GAGCGTGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGA
TGTTTTGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATC
TTGCAGAATTGCGTGGGAAAGGTGTTGACGCACAGATTGCATCTGGAGGA
AGCCGCATGT
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