FC929986

Overview
NameFC929986
Unique NameFC929986
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  459 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLEVGG 653
            K Y+G+R R WG++ AEIR+PN++ SR+WLG++ T   AA+AYD A F LRG  A LNFP  + G
Sbjct:   26 KPYKGIRMRKWGKWVAEIREPNKR-SRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAG 89          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLEVGGTLDS 665
            +RGVR+R WG++ AEIR+P + G+R+WLGTF TA +AA AYD AA  + GS A LNFP  VG    S
Sbjct:   78 FRGVRQRIWGKWVAEIREP-KIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVGSEFTS 143          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF69_ARATH (Ethylene-responsive transcription factor ERF069 OS=Arabidopsis thaliana GN=ERF069 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 43/94 (45.74%), Postives = 53/94 (56.38%), Query Frame = 3
Query:  360 VNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKG--SRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNF 635
            V D +D P   K +                  +K +RGVR+RPWG++AAEIR    KG   R+WLGTF+TA EAA AYDNAA +L G  A  NF
Sbjct:   40 VIDHSDPPEVGKTRFKIRIPASLLAARNTTANKKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR R WG++ +EIR+P RK SR+WLGTF T   AA+A+D AA  ++G+ A+LNFP
Sbjct:   43 YRGVRMRTWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFP 99          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 3
Query:  456 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            E+ ++G+R R WG++ AEIR+PN++ SR+WLG++ T   AA+AYD A F LRG  A LNFP
Sbjct:   18 ERPFKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNF 635
            + GVR+RPWGR++AEIRD   +  R WLGTFDTA EAA+AYD AA RLRG+KA  NF
Sbjct:  116 FMGVRKRPWGRWSAEIRDRIGR-CRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNF 171          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR R WG++ +EIR+P RK SR+WLGTF TA  A +A+D AA  ++G+ AILNFP
Sbjct:   19 YRGVRMRSWGKWVSEIREP-RKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFP 75          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 3
Query:  354 SNVNDDADNPVAVKNKDPXXXXXXXXXXXXXXIEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLEVGGTLDSKV 671
            SNV+DD  NP +                         YRGVR R WG++ +EIR+P RK SR+WLGT+ TA  AA+A+D AA  ++G+   LNFP E+ G L   V
Sbjct:   59 SNVSDDNKNPTS-------------------------YRGVRMRSWGKWVSEIREP-RKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFP-ELSGLLPRPV 137          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 3
Query:  456 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            ++ Y+G+R R WG++ AEIR+PN++ SR+WLG++ T   AA+AYD A F LRG  A LNFP
Sbjct:   18 DRPYKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFP 77          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  450 IEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLEVGGT 656
            ++ K +RGVR+R WG + AEIR P  K  R+WLGTF+TA EAA+AYD AA  + G  A  NFPL    T
Sbjct:    2 VQTKKFRGVRQRHWGSWVAEIRHPLLK-RRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNT 69          
The following BLAST results are available for this feature:
BLAST of FC929986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
ERF08_ARATH2.177e-1353.85Ethylene-responsive transcription factor ERF008 OS... [more]
DRE2B_ARATH2.177e-1356.72Dehydration-responsive element-binding protein 2B ... [more]
ERF69_ARATH2.843e-1345.74Ethylene-responsive transcription factor ERF069 OS... [more]
ERF37_ARATH3.713e-1358.62Ethylene-responsive transcription factor ERF037 OS... [more]
ERF11_ARATH3.713e-1354.10Ethylene-responsive transcription factor ERF011 OS... [more]
ERF84_ARATH4.850e-1366.67Ethylene-responsive transcription factor ERF084 OS... [more]
ERF43_ARATH4.850e-1360.34Ethylene-responsive transcription factor ERF043 OS... [more]
ERF35_ARATH4.850e-1341.51Ethylene-responsive transcription factor ERF035 OS... [more]
ERF10_ARATH4.850e-1354.10Ethylene-responsive transcription factor ERF010 OS... [more]
WIN1_ARATH6.334e-1353.62Ethylene-responsive transcription factor WIN1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34002E10EF PostHarvC1 Citrus clementina cDNA clone C34002E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929986 ID=FC929986; Name=FC929986; organism=Citrus clementina; type=EST; length=671bp
ACTCAAATACACCAAACCAATTTCCATTTACATTTCATCTTACCTTCAAT
ATGGCATCTCTGAATGAAGCATCAACTTTAGAACTCATCAGCCAGTATCT
TCTCGCTGATCAGTACTTCACTTCTTCAATTGATCATACCCATAGCTTCA
AAAATATCTCAAACCTTCCTCAAAGCCCGAGCTTATTCAACAACCCAACA
ACAACTACAACAGCAACAACAGTTACTACTACAACTGATCGTGATAATAT
AAACAGCAGAAACAAGCCTTCAAGCACTTTAAAACAACGGAAGCCGGCCT
GTGTAAAAAACGTAACCATACCCCAAACTACAAGCTTCAATTTGATGAGC
TGCTCCAATGTTAATGATGATGCTGATAACCCAGTTGCTGTGAAAAATAA
AGATCCGGATGCTGCTGCTGATGATAATAATAATAATAATAATAACAATA
TTGAGGAAAAGCATTACAGAGGAGTAAGGAGACGGCCGTGGGGCAGGTAT
GCAGCTGAAATCCGGGACCCGAATAGAAAAGGGAGCCGGGTTTGGCTTGG
AACTTTTGATACTGCCGTTGAAGCCGCCAAAGCTTATGACAACGCTGCGT
TTAGGCTGCGTGGAAGCAAAGCGATATTGAATTTCCCTCTCGAAGTTGGC
GGGACTTTGGATTCTAAAGTG
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