FC929986

Overview
NameFC929986
Unique NameFC929986
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR R WG++ +EIR P RK +R+WLGTF TA  AA+A+D AA  ++GS A+LNFP
Sbjct:   79 YRGVRMRSWGKWVSEIRQP-RKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 135          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  456 EKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLEVG 650
            +KH  YRGVR R WG++ +EIR+P RK SR+WLGT+ TA  AA+A+D AA  ++G+ A LNFP   G
Sbjct:   95 DKHPTYRGVRMRSWGKWVSEIREP-RKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAG 160          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR+R WG++ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G+ AILNFP
Sbjct:   36 YRGVRKRNWGKWVSEIREP-RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFP 92          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  450 IEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            + +  YRG+RRR WG++ +EIR+P +K +R+WLG+++TA  AA AYD AA  LRG    LNFP
Sbjct:   15 VNQLSYRGIRRRKWGKWVSEIREPGKK-TRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFP 76          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR R WG++ +EIR+P RK SR+WLGTF T   AA+A+D AA  ++G+ AILNFP
Sbjct:   51 YRGVRMRNWGKWVSEIREP-RKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP 107          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR+R WG++ +EIR+P  K +R+WLG+F+T   AA AYD AAF  RG +A LNFP
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTK-NRIWLGSFETPEMAATAYDVAAFHFRGREARLNFP 80          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFP 638
            YRGVR+R WG++ AEIR+P +K +R+WLG+F TA EAA AYD AA +L G  A LN P
Sbjct:   28 YRGVRQRTWGKWVAEIREP-KKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLP 84          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNF 635
            YRGVR+R WG++ AEIR+PNR G R+WLG+F TA+EAA AYD AA  + G  A +NF
Sbjct:   76 YRGVRQRTWGKWVAEIREPNR-GRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNF 131          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  465 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNF 635
            YRGVR+R WG++ AEIR+PNR G R+WLG+F TA+EAA AYD AA  + G  A +NF
Sbjct:   76 YRGVRQRTWGKWVAEIREPNR-GRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNF 131          
BLAST of FC929986 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 3
Query:  459 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNAAFRLRGSKAILNFPLE 644
            K YRGVR+R WG++ +EIR P + G R+WLG++D   +AA+AYD A F +RG K + NFP +
Sbjct:   25 KCYRGVRKRSWGKWVSEIRVP-KTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTD 85          
The following BLAST results are available for this feature:
BLAST of FC929986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
ERF36_ARATH6.334e-1360.34Ethylene-responsive transcription factor ERF036 OS... [more]
ERF34_ARATH6.334e-1355.22Ethylene-responsive transcription factor ERF034 OS... [more]
TINY_ARATH8.272e-1358.62Ethylene-responsive transcription factor TINY OS=A... [more]
ERF22_ARATH8.272e-1352.38Ethylene-responsive transcription factor ERF022 OS... [more]
DREB3_ARATH8.272e-1360.34Dehydration-responsive element-binding protein 3 O... [more]
ERF21_ARATH1.080e-1258.62Ethylene-responsive transcription factor ERF021 OS... [more]
DRE2F_ARATH1.411e-1260.34Dehydration-responsive element-binding protein 2F ... [more]
DRE2A_ORYSJ1.411e-1261.40Dehydration-responsive element-binding protein 2A ... [more]
DRE2A_ORYSI1.411e-1261.40Dehydration-responsive element-binding protein 2A ... [more]
ERF15_ARATH1.843e-1251.61Ethylene-responsive transcription factor ERF015 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34002E10EF PostHarvC1 Citrus clementina cDNA clone C34002E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929986 ID=FC929986; Name=FC929986; organism=Citrus clementina; type=EST; length=671bp
ACTCAAATACACCAAACCAATTTCCATTTACATTTCATCTTACCTTCAAT
ATGGCATCTCTGAATGAAGCATCAACTTTAGAACTCATCAGCCAGTATCT
TCTCGCTGATCAGTACTTCACTTCTTCAATTGATCATACCCATAGCTTCA
AAAATATCTCAAACCTTCCTCAAAGCCCGAGCTTATTCAACAACCCAACA
ACAACTACAACAGCAACAACAGTTACTACTACAACTGATCGTGATAATAT
AAACAGCAGAAACAAGCCTTCAAGCACTTTAAAACAACGGAAGCCGGCCT
GTGTAAAAAACGTAACCATACCCCAAACTACAAGCTTCAATTTGATGAGC
TGCTCCAATGTTAATGATGATGCTGATAACCCAGTTGCTGTGAAAAATAA
AGATCCGGATGCTGCTGCTGATGATAATAATAATAATAATAATAACAATA
TTGAGGAAAAGCATTACAGAGGAGTAAGGAGACGGCCGTGGGGCAGGTAT
GCAGCTGAAATCCGGGACCCGAATAGAAAAGGGAGCCGGGTTTGGCTTGG
AACTTTTGATACTGCCGTTGAAGCCGCCAAAGCTTATGACAACGCTGCGT
TTAGGCTGCGTGGAAGCAAAGCGATATTGAATTTCCCTCTCGAAGTTGGC
GGGACTTTGGATTCTAAAGTG
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