FC929989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 240 + GG D K++ G+ +Y+ VT+K YWQ ++ + +GN+ T +C+GGC AIVD+GTSLL GP V E+ AIG ++ E Sbjct: 244 MLGGTDSKYYHGELSYLNVTRKAYWQVHMDQLEVGNELT-LCKGGCEAIVDTGTSLLVGPVEEVKELQKAIGAVPLIQGE 322
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG----EGVVSAECKLV 252 + GG DPK++ G YVPVT++ YWQ ++ + IG+Q T +C+ GC AIVD+GTSL+ GP V + AIG +G +CK V Sbjct: 232 LLGGTDPKYYTGDFNYVPVTRQAYWQIHMDGMSIGSQLT-LCKDGCEAIVDTGTSLITGPPAEVRALQKAIGAIPLIQGEYMIDCKKV 318 HSP 2 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 26/61 (42.62%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 520 SLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPP 702 ++P GE +IDC ++PT+P +SF +G K ++L+ EQY+LK +G +C+SG M ++PP Sbjct: 303 AIPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPP 363
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 240 + GG DPK++ G ++V VT+K YWQ ++ + + N T +C+GGC AIVD+GTSL+ GPT V E+ AIG + ++ + Sbjct: 234 LLGGTDPKYYSGDFSWVNVTRKAYWQVHMDSVDVANGLT-LCKGGCEAIVDTGTSLITGPTKEVKELQTAIGAKPLIKGQ 312
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 4 FGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 243 FGG DP HF G ++PVTK+GYWQ L I +G+ + C GC AIVD+GTSL+ GP + ++ AIG +G + +C Sbjct: 235 FGGYDPSHFSGSLNWIPVTKQGYWQIALDGIQVGD-TVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATPMDGEYAVDC 316
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 4 FGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAECK 246 FGG D HF G +VPVTK+GYWQ L +I +G S C GC AIVD+GTSL+ GP+ + ++ AIG +G + EC+ Sbjct: 233 FGGYDSSHFSGSLNWVPVTKQGYWQIALDEIQVGG-SPMFCPEGCQAIVDTGTSLITGPSDKIIQLQAAIGATPMDGEYAVECE 315
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 240 + GG D K++KG +Y+ VT+K YWQ ++ + +G+ T +C+GGC AIVD+GTSL+ GP V E+ AIG ++ E Sbjct: 244 MLGGTDSKYYKGPLSYLNVTRKAYWQVHMEQVDVGSSLT-LCKGGCEAIVDTGTSLIVGPVDEVRELQKAIGAVPLIQGE 322
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 243 +FGG D HF G +VPVTK+ YWQ L +I +G + C GC AIVD+GTSL+ GP+ + ++ +AIG +G + EC Sbjct: 237 IFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGG-TVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVDGEYAVEC 319
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 240 + GG D K+++G TY VT++ YWQ ++ + +G+ T VC+GGC AIVD+GTSL+ GP V E++ AIG ++ E Sbjct: 219 MLGGTDSKYYRGSLTYHNVTRQAYWQIHMDQLDVGSSLT-VCKGGCEAIVDTGTSLMVGPVDEVRELHKAIGAVPLIQGE 297
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 1 VFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 240 + GG D +++ G+ +Y+ VT+K YWQ ++ + +G++ T +C+GGC AIVD+GTSLL GP V E+ AIG ++ E Sbjct: 241 MLGGTDSRYYHGELSYLNVTRKAYWQVHMDQLEVGSELT-LCKGGCEAIVDTGTSLLVGPVDEVKELQKAIGAVPLIQGE 319
BLAST of FC929989 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 4 FGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG-----GEGVVSAECKLV 252 FG +D + G TYVP+T + YW+F + D I QS G C C AI DSGTSL+AGP +T +N +G GEGV S +C ++ Sbjct: 219 FGSIDNTKYTGDITYVPLTNETYWEFVMDDFAIDGQSAGFCGTTCHAICDSGTSLIAGPMADITALNEKLGAVILNGEGVFS-DCSVI 305 The following BLAST results are available for this feature:
BLAST of FC929989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929989 ID=FC929989; Name=FC929989; organism=Citrus clementina; type=EST; length=704bpback to top |