FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_LACCB (Glycogen synthase OS=Lactobacillus casei (strain BL23) GN=glgA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.727e-25 Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGYNKPVRGR--KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPWRSSLNS 697 IHN+ +QG F P+ + F +G+N G+ INW+K GI +D+V TVSP YA+E + G LD +RK K GI+NG+D + +NP TD+ + YDA + K K+ALQ E+ LP R P+ + RL QKG+D+L A+ +F ++ NVQ++VLGTG + L+S Sbjct: 164 IHNLQFQGWFP---------PSTLATVFGIGREGFNDDGFGQDGSINWLKGGINYADLVSTVSPSYAKE-IQTPAFGEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKN-LAGKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSS 343 HSP 2 Score: 29.6462 bits (65), Expect = 1.727e-25 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMY 96 V ANDWHT+ IP LK Y Sbjct: 130 VIHANDWHTAFIPVLLKEKY 149
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_LACC3 (Glycogen synthase OS=Lactobacillus casei (strain ATCC 334) GN=glgA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.727e-25 Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGYNKPVRGR--KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPWRSSLNS 697 IHN+ +QG F P+ + F +G+N G+ INW+K GI +D+V TVSP YA+E + G LD +RK K GI+NG+D + +NP TD+ + YDA + K K+ALQ E+ LP R P+ + RL QKG+D+L A+ +F ++ NVQ++VLGTG + L+S Sbjct: 164 IHNLQFQGWFP---------PSTLATVFGIGREGFNDDGFGQDGSINWLKGGINYADLVSTVSPSYAKE-IQTPAFGEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKN-LAGKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSS 343 HSP 2 Score: 29.6462 bits (65), Expect = 1.727e-25 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMY 96 V ANDWHT+ IP LK Y Sbjct: 130 VIHANDWHTAFIPVLLKEKY 149
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_DESVM (Glycogen synthase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glgA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.247e-25 Identity = 75/183 (40.98%), Postives = 101/183 (55.19%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 IHN+A+QGRFA F LP Q S +F +N +KAGI +DMV TVSP YA+E++ G G L+ I +R+ + GI+NG D WNP DK++ +Y D K K AL E+GL P + PV+GFIGRL QKG D+L +P ++ NV +I+LG G Sbjct: 169 IHNLAFQGRFASRLFTGCGLPPQAWTMSGVEFWGDFNL---------LKAGIAYADMVTTVSPSYAREIL-GPAYGCGLEGILQVRQHALHGILNGADYGIWNPAQDKFLPCRYGPDDPQGFAGKQRCKAALLDELGLAPELAHRPVLGFIGRLRGQKGIDLLLDIVPRLMERNVGVIILGEG 341 HSP 2 Score: 25.409 bits (54), Expect = 2.247e-25 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V ANDW + L+P YL Sbjct: 135 VLHANDWQSGLVPAYL 150
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.248e-25 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 K IHN+ +QG + E G L NL A + + DG VR +N+MK GIL +D V TVSP YA E+ + E G LD I+R ++GI+NG+D + NP TDK + Y A + K K ALQ E GLP +++PVI + RL QKG ++ + + + ++ +VQ+IVLGTG Sbjct: 158 KTVLTIHNLQFQGEYGREVLGELFNLDASY-----YDDG---TVRFDTAVNFMKTGILYADKVNTVSPTYASEIQT-EAFGQGLDEILRMHNWKLRGILNGIDYERNNPATDKNLVANYSAKK-LKGKVKDKLALQKEFGLPQRKDVPVIAMVSRLTAQKGFQLVVSEMQNLVQFDVQVIVLGTG 332 HSP 2 Score: 28.1054 bits (61), Expect = 2.248e-25 Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 D++ V ND+HT+ IP LK Y Y+S K V Sbjct: 128 DILHV-NDYHTAFIPFLLKEKYGWINAYQSIKTV 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_EUBE2 (Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.926e-25 Identity = 70/199 (35.18%), Postives = 109/199 (54.77%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLN--SWRY 706 K IHN+ +QG + + + LP ++ +S D ++ Y+ N++K GI+ +D V TVS YA+E+ + G LD ++R + GIVNG+D E+NP TDK I Y+ T K K ALQ E+GL D+ +IG + RL +QKG D++A + E+VQ +VLGTG++ + + W+Y Sbjct: 159 KSIMTIHNLKFQGIWDLKKVKDITGLPDEYFTS-DKLEAYDDA------NYLKGGIVYADRVTTVSETYAEEIKT-PFYGENLDGLMRARSNVLSGIVNGIDYDEYNPETDKRIPNNYNQVTFRKEKWKNKVALQKELGLTEDKGKFMIGLVSRLTDQKGLDLVAYVMDQLCAEDVQFVVLGTGEERYENMFRHYDWKY 349 HSP 2 Score: 30.4166 bits (67), Expect = 2.926e-25 Identity = 12/28 (42.86%), Postives = 15/28 (53.57%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 NDW T LIP YLK + Y+ K + Sbjct: 134 NDWQTGLIPVYLKERFSQGEFYQGIKSI 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_AZOSE (Glycogen synthase OS=Azoarcus sp. (strain EbN1) GN=glgA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.953e-25 Identity = 65/187 (34.76%), Postives = 109/187 (58.29%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG----KKPWR 682 +HN+A+QG F + L LP + S + ++ + K ++++KAG+ +D ++ VSP YA+E+ + E G + ++ R + GI+NG+D+ WNP TD ++ YDA T+ D P K ALQAE+GL D + ++G + RL +QKG D++ A+P + VQ+ +LG G ++ WR Sbjct: 174 VHNLAFQGIFPLDVAERLGLPPESLKS-EGVEYWGK------LSFLKAGLYYADRIVAVSPTYAREIRT-EAHGCGMQGLLETRANRLAGILNGIDMDAWNPRTDPHLDTNYDADTLEDKAPN-KRALQAELGLAADDDALLLGMVTRLTDQKGIDLVLDALPELLARPVQLALLGGGDARFEQAWR 351 HSP 2 Score: 25.0238 bits (53), Expect = 4.953e-25 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 49 NDWHTSLIPCYLK 87 NDW T+L P YLK Sbjct: 149 NDWPTALAPAYLK 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRZJ (Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.451e-25 Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 IHN+ +QG+F+ G L F + + DG + +NWMKAGIL ++ V TVSP YA E+++ + G LD I++ + GIVNG+D +NP TD + ++ + K K LQ VGLPV ++P++G + RL QKG D++ ++ H ++E+VQI++LGTG + + SW Sbjct: 162 IHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAF-SW 341 HSP 2 Score: 22.7126 bits (47), Expect = 6.451e-25 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMY 96 +D+HT++IP LK Y Sbjct: 132 HDYHTAMIPFLLKEKY 147
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRPJ (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.451e-25 Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 IHN+ +QG+F+ G L F + + DG + +NWMKAGIL ++ V TVSP YA E+++ + G LD I++ + GIVNG+D +NP TD + ++ + K K LQ VGLPV ++P++G + RL QKG D++ ++ H ++E+VQI++LGTG + + SW Sbjct: 162 IHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAF-SW 341 HSP 2 Score: 22.7126 bits (47), Expect = 6.451e-25 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMY 96 +D+HT++IP LK Y Sbjct: 132 HDYHTAMIPFLLKEKY 147
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRS7 (Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.451e-25 Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR---KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 F IHNIA+QG+F P F G + R +NWMKA +L +D V TVSP YA E + G LD ++R + GIVNG+D +NP D ++ + A + K K+ LQ +GLPV ++P+IG + RL +QKG ++ + H ++++VQ+++LGTG + ++ SW Sbjct: 160 FTIHNIAFQGQFD---------PGMLGDLFGVGIGRYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHE-IQTPAFGQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAED-LSGKAATKQVLQERLGLPVRADVPLIGMVSRLTDQKGFQLVLEELSHILQQDVQLVLLGTGDPDYEAAF-SW 341 HSP 2 Score: 26.5646 bits (57), Expect = 6.451e-25 Identity = 13/35 (37.14%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 D++ V +D+HT++IP LK Y Y++ + VF Sbjct: 127 DILHV-HDYHTAMIPFLLKEKYHWIQAYQAIRTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_MOOTA (Glycogen synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=glgA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25 Identity = 70/192 (36.46%), Postives = 118/192 (61.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSWR 703 + IHN+ YQG F + L +F + ++ Y + +++MKAGIL +D+V TVS YA E+ + E G LD ++RK ++GI+NG+D +E++P TD+ + V YDA ++ K K ALQ E+ LPV R++PV+G I RL QKG D+LAA + +++++Q ++LG+G+ ++ + ++ Sbjct: 162 YTIHNLQYQGTFPRNILKTMALSEEFFVP-ERLEFYGQ------VSYMKAGILYADLVNTVSKKYALEIQTPE-YGERLDGLLRKRAADLRGILNGIDYEEFDPATDRRLAVNYDADH-LEKKGENKAALQREMELPV-RDVPVLGLISRLVSQKGLDLLAAILDPLMQQDLQFVLLGSGEDYYQQLFSRYK 343 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |