FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.388e-25 Identity = 66/182 (36.26%), Postives = 102/182 (56.04%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 +HN+ +QG F +L + + F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R + GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +GRL +QKG DILA AI + +VQ+++LG G +PW Sbjct: 173 VHNMQHQGNFYPGAMEVLGIGWEH---FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLVGRLVKQKGIDILAEAIHRILALDVQVVMLGAG-EPW 344 HSP 2 Score: 33.113 bits (74), Expect = 8.388e-25 Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYK 99 VF A+DWHT+ +P +L T+Y+ Sbjct: 139 VFHAHDWHTAAVPVFLNTLYR 159
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT--GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 T ++PL L K C + K +HN+ YQG F E L Q D ++ Y +N++K G+ +D++ TVSP YA+E+++ D G LD ++RK + GI+NG+D + WNP D +I KY + D K KE L A G+ P+I FIGR+ QKG DI+ A+P+ IK + I GTG+ Sbjct: 155 TALIPLYL---KTLYRECSCFEKTKTVLTVHNLGYQGIFPREKLELTGF-GQEMFHIDGLEFYGM------VNFLKGGLFNADIITTVSPTYAKEILT-PDYGAGLDGVLRKRKENLVGIINGIDYKIWNPEEDPFIAKKYGLQNIND-KQKNKEDLIALAGINSSLQDPIIAFIGRMVYQKGIDIVVDAMPNLIKNGISFIFEGTGE 350
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRP4 (Glycogen synthase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.093e-24 Identity = 69/190 (36.32%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 IHN+ +QG+F+ G L F + + DG + +NWMKAGIL ++ V TVSP YA E+++ + G LD I++ + GIVNG+D +NP TD + ++ + K K LQ VGLPV P++G + RL QKG D++ ++ H ++E+VQI++LGTG + + SW Sbjct: 162 IHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRXXXPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAF-SW 341 HSP 2 Score: 24.2534 bits (51), Expect = 1.093e-24 Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 +D+HT++IP LK Y+ Y+ + V Sbjct: 132 HDYHTAMIPFLLKEKYRWIQAYEDIETV 159
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBA (Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.093e-24 Identity = 69/186 (37.10%), Postives = 105/186 (56.45%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 K F IHNIA+QG F + LP F +D+ N ++ + +MK I SDM+ TVS YA+E+ + E G LD ++R+ ++GI+NG+D E+NP D I YD + + D K K LQ+E+GL V+ NIP+I + RL QKG D+L ++ ++Q++++GTG K Sbjct: 158 KSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDNLINKNYDVNNIND-KYENKRNLQSELGLNVNENIPIIAMVTRLTSQKGLDLLVNISERLLQNDIQLVIVGTGDK 334 HSP 2 Score: 28.4906 bits (62), Expect = 1.093e-24 Identity = 15/30 (50.00%), Postives = 16/30 (53.33%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGM-YKSAKVVF 135 NDW T +IP LK Y K M Y K VF Sbjct: 132 NDWQTGMIPVLLKLEYMRKDMFYWDIKSVF 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.093e-24 Identity = 69/186 (37.10%), Postives = 105/186 (56.45%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 K F IHNIA+QG F + LP F +D+ N ++ + +MK I SDM+ TVS YA+E+ + E G LD ++R+ ++GI+NG+D E+NP D I YD + + D K K LQ+E+GL V+ NIP+I + RL QKG D+L ++ ++Q++++GTG K Sbjct: 158 KSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDSLINKNYDVNNIND-KYENKRNLQSELGLSVNENIPMIAMVTRLTSQKGLDLLVHISERLLQNDIQLVIVGTGDK 334 HSP 2 Score: 28.8758 bits (63), Expect = 1.093e-24 Identity = 16/34 (47.06%), Postives = 17/34 (50.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVF 135 V NDW T +IP LK Y K M Y K VF Sbjct: 128 VIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVF 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.347e-24 Identity = 72/184 (39.13%), Postives = 99/184 (53.80%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTG 667 + IHN+AYQG F +DF LL LP++ G+ +++MKAG+ + + TVSP YA E+ + E G LD +IR G + GI+NG+D WNP +D I Y A ++D K L K ALQ E+GL VD PV + RL QKG D+L A+P + Q+ V G G Sbjct: 164 YTIHNLAYQGLFDEDDFHLLGLPSRLMVPVGL------EFHGQ-LSFMKAGLKYAHRITTVSPTYAHEIAT-EAFGCGLDGVIRARGADVSGILNGVDGAVWNPASDPLIAAPYSAD-MLDGKALCKAALQRELGLAVDAGAPVFAVVSRLTSQKGLDLLLDALPALLNFPAAGGPQLAVQGNG 338
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ANATD (Glycogen synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glgA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.408e-24 Identity = 70/195 (35.90%), Postives = 105/195 (53.85%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 K IHN+ YQG F E + LL+LP ++ S D + Y+ I+++K GI+ SD V+TVS YA E V G L ++ G K GI+NG+D + +NP TDK I V YD++T + K K LQ + LPV I +IG + RL ++KG +++ I + VQ+++LG G + L + Sbjct: 157 KTILTIHNLKYQGIFPKEVMYDLLSLPDEYFSE-DKLKFYDA------ISFLKGGIIYSDKVVTVSRTYANE-VRTLSYGEGLHGLLSGIGEKLIGIINGIDYEVYNPATDKLIFVNYDSNTFENRKKENKFRLQQMLNLPVSDEIVLIGMVSRLTKEKGIELIERIINKLLTLPVQLVILGAGDYHYEQMLKQY 343 HSP 2 Score: 31.5722 bits (70), Expect = 2.408e-24 Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 D++ V NDWHTS+IP LK Y + K + Sbjct: 127 DIIHV-NDWHTSVIPVLLKAHYGHSDKHNKIKTI 159
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CALS8 (Glycogen synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glgA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.408e-24 Identity = 68/186 (36.56%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFED-FGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 K IHN+ YQG F E + LL+LP ++ ++ F D I+++K GI+ +D V+TVS YA E+ + G L ++ G K GIVNG+D + NP TDK I V YDA+T K K LQ + LPV +I +IG + RL ++KG D++ + + VQ+++LG G Sbjct: 157 KTVLTIHNLRYQGVFPKEVMYDLLSLPDEYFDENKLKFYDA---------ISFLKGGIIFADKVVTVSKTYANEIRT-LSHGEGLHGLLSGIGEKLVGIVNGIDYEVCNPATDKLIFVNYDANTFESRKKENKFRLQQMLNLPVSDDIVLIGMVSRLTKEKGIDLIERILSRLLTLPVQLVILGAG 332 HSP 2 Score: 32.7278 bits (73), Expect = 2.408e-24 Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 D++ V NDWHTS+IP LK Y ++ K V Sbjct: 127 DIIHV-NDWHTSVIPVLLKAHYSHSPKHQKIKTV 159
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_MARAV (Glycogen synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glgA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.132e-24 Identity = 69/194 (35.57%), Postives = 110/194 (56.70%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 PK F IHN+AYQG F+ E F L LP ++F++ + + ++++K G++ SD + TVSP YA E+ + G LD ++R + + GI+NG+D ++WNP D ++ Y A + K + LQ E+GL V P++GF+GRL EQKG D L I ++ Q +LG+G+ ++ SL + Sbjct: 161 PKTVFTIHNLAYQGLFSHETFRALGLPDSLWR-YEFLEFHGQ------LSFIKGGLVFSDAITTVSPSYADEIQTPWF-GNGLDGLLRHKSSRLHGILNGIDTRQWNPEADPHLEFHYGADYPAN-KSQCQARLQQELGLEVC-GAPLLGFVGRLVEQKGLDWLLGVIKPLLERGCQFALLGSGEHHYQESLKA 344 HSP 2 Score: 22.3274 bits (46), Expect = 3.132e-24 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 49 NDWHTSLIPCYL 84 NDW ++LIP +L Sbjct: 143 NDWQSALIPVFL 154
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_DESVV (Glycogen synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glgA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.132e-24 Identity = 73/179 (40.78%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 IHN+A+QGRFA F LP Q S +DG N +KAGI +D V TVSP YA+E++ G G LD I+RK + GI+NG D W+P D+++ +Y T + K K AL E+GL P P++GFIGRL QKG D+L +P ++ +V +I+LG G Sbjct: 169 IHNLAFQGRFASRLFETSGLPPQAWS----VDGAEF---WGDFNLLKAGIAYADKVTTVSPSYAREIL-GPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRY-TPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLMESDVGVIILGEG 338 HSP 2 Score: 23.8682 bits (50), Expect = 3.132e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V A+DW T+L+P +L Sbjct: 135 VLHAHDWQTALVPAFL 150 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |