FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_DESVH (Glycogen synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glgA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.132e-24 Identity = 73/179 (40.78%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 IHN+A+QGRFA F LP Q S +DG N +KAGI +D V TVSP YA+E++ G G LD I+RK + GI+NG D W+P D+++ +Y T + K K AL E+GL P P++GFIGRL QKG D+L +P ++ +V +I+LG G Sbjct: 169 IHNLAFQGRFASRLFETSGLPPQAWS----VDGAEF---WGDFNLLKAGIAYADKVTTVSPSYAREIL-GPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRY-TPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLMESDVGVIILGEG 338 HSP 2 Score: 23.8682 bits (50), Expect = 3.132e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V A+DW T+L+P +L Sbjct: 135 VLHAHDWQTALVPAFL 150
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPE (Glycogen synthase OS=Clostridium perfringens GN=glgA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 79/211 (37.44%), Postives = 114/211 (54.03%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAF----EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 TG++P V KL S K K IHN+ +QG F+ E FG P + S +F G +++MK I SD +LTVS YA+E+ + G LD ++R+ G +KGIVNG+D E+NP D I + T+ D K L K ALQ E+GLP++ +IP+I + RL QKG D++ ++ NVQ+++LGTG Sbjct: 142 TGMIP---VLHKLEYSKDPFYKNIKTVTSIHNLLFQGNFSADVLPELFGYDYEPVR-NGSLEFYGG---------MSFMKGAINYSDRILTVSETYAKEIKTPYF-GENLDGLLRERGYALKGIVNGIDYDEFNPSKDSLIAKNFSVKTIED-KVLNKLALQKELGLPINPDIPMISIVSRLTNQKGCDLIVNIANRLLQRNVQLVILGTG 337
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.305e-24 Identity = 71/190 (37.37%), Postives = 105/190 (55.26%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK----INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 P IHN+AYQG+FA E G + LP SSFD V G + I+++KAG+ +D + TVSP YA+E+ S E G+ L ++R + GI+NG+D+ WNP TD +I ++ A + + K LQ + L P++G I RL QKG D+L AIP + E +Q+ +LG+G + Sbjct: 159 PGTVMTIHNMAYQGKFAPELIGAIGLPW---SSFD--------VNGLEYFGGISFLKAGLQFADRITTVSPTYAREIQSDEG-GMGLGGLLRARAGALSGILNGIDIAVWNPQTDSHIAYRFGAED-LTFRAANKAVLQQQFNLDSSDEAPLLGVISRLSWQKGLDLLLEAIPTILGEGMQLALLGSGDR 335 HSP 2 Score: 22.3274 bits (46), Expect = 5.305e-24 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPK 105 A+DW L P YL +P+ Sbjct: 139 AHDWQAGLAPAYLHYDNRPR 158
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_BACLD (Glycogen synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.904e-24 Identity = 71/198 (35.86%), Postives = 110/198 (55.56%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH-FIKENVQIIVLGTGKKPWRSSLNSWRY 706 K F IHN+ +QG F E LL L ++ + ++ Y IN+MK GI+ +D V TVSP Y E+++ G L+ ++ +K + GI+NG+D ++PL D +I YDA D K K +Q GLPV+ +IP+I + RL +QKG D++ + F +E++Q+IVLGTG+ + N +RY Sbjct: 157 KSVFTIHNLQFQGIFPKEAVHDLLGLDISHFTT-EKLEFYGN------INYMKGGIIAADQVTTVSPTYRDEILTPY-YGERLEGVLSDKKDALTGILNGIDDVLYDPLNDPHIDYHYDAVN-RDGKRKNKAVIQKTFGLPVNEDIPLISMVARLTKQKGFDLIKRVLHELFEEEDMQLIVLGTGEAEFE---NYFRY 342 HSP 2 Score: 30.8018 bits (68), Expect = 6.904e-24 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 V +DWHT ++ LK Y+ K Y+ K VF Sbjct: 128 VIHTHDWHTGMVNYLLKEEYRKKPFYQHMKSVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.905e-24 Identity = 66/186 (35.48%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK---INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 K F IHNI +QG+F P+ F D + R +NWMKA +L +D V TVSP YA+E+++ E G LD I+R + G+VNG+D ++P TD ++ V + + K K ALQ VGLPV ++P++G + RL +QKG ++ + ++ ++QI++LGTG Sbjct: 157 KTVFTIHNIEFQGQFN---------PSMLGELFGVGDERYRDGTLRWNDCLNWMKAAVLYADRVTTVSPSYAKEIMTPEF-GKGLDQIMRMESGKLSGVVNGIDTDLFDPETDPHLAVHFSKDD-LSGKAKNKAALQERVGLPVREDVPLVGIVSRLTDQKGFQLVVDQLNTMMQLDLQIVLLGTG 331 HSP 2 Score: 27.335 bits (59), Expect = 6.905e-24 Identity = 14/35 (40.00%), Postives = 20/35 (57.14%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 D++ V +D+HT++IP LK Y Y K VF Sbjct: 127 DILHV-HDYHTAMIPYLLKEKYHWINAYHGIKTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.906e-24 Identity = 69/186 (37.10%), Postives = 97/186 (52.15%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-KENVQIIVLGTG 667 K F IHN+ YQG F+ +L + + + F D IN+MK I+ SD V TVS YA E + G LD +IR+ K GI NG+D WNP TDKY+ Y + D K K+ALQ GL ++N+PV + RL E KG +++ + F+ E+VQ+++LGTG Sbjct: 157 KTVFTIHNLKYQGVFSSNSLRQTDLSPMYFTEDALKFYDA---------INFMKGAIVFSDRVTTVSKTYADE-IKYSFFGEGLDGVIRQYHYKISGITNGIDTTIWNPETDKYLFKNYSLKNIKD-KDENKKALQRMYGLE-EKNVPVFAMVTRLVENKGLELVRYIMDEFLTTEDVQVVILGTG 330 HSP 2 Score: 31.9574 bits (71), Expect = 6.906e-24 Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 +NDWHT+++ Y + K Y+S K VF Sbjct: 131 SNDWHTAMVNVYARDFAKGDPFYESIKTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24 Identity = 67/185 (36.22%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 K F IHN+ +QG F E G LLNL ++ S + ++ Y +++MK ++ + ++ TVSP Y +E+ + G LD ++R + + GI+NG+D + +NP D YI V YD +T+ K + K ALQ LP + ++PVI + RL +QKG D++ I E+VQ+I+LGTG+ Sbjct: 157 KTVFTIHNLQFQGIFPREILGDLLNLSDRY-FSIEHLEFYGH------VSFMKGALVSAHLITTVSPTYKEEIQTPY-YGERLDGLLRARSSHLVGILNGIDDEIYNPKKDPYIAVPYDVTTIA-RKSINKRALQQHFSLPSEEDVPVIAIVSRLTKQKGLDLVKCVFHEIIAEHVQMIILGTGE 332
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.979e-24 Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKS--SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA--KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 676 P F IHNIAYQG+F + L P + + F++ D ++++K+G+ SD + TVSP YA+E+ + G ++ ++ R + GI+NG D + WNP D ++ A T DA K K ALQAE+GL + P++ + RL + KG D++ AA+P+ +K Q+ V+GTG +P Sbjct: 162 PATVFTIHNIAYQGQFPRDLVPRLGFPPEMYAMDGFEYYD---------TLSFLKSGLFYSDRITTVSPRYAKEIQTPAF-GCGMEGLLAHRAADLTGILNGADYEVWNPAADTHLD---HAFTPGDAAGKACNKAALQAELGLSQAPDAPLMVIVSRLNDHKGMDLVLAALPNILKMGAQVAVVGTGDRP 339 HSP 2 Score: 25.409 bits (54), Expect = 8.979e-24 Identity = 10/16 (62.50%), Postives = 10/16 (62.50%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V ANDW T L P YL Sbjct: 138 VLHANDWQTGLAPAYL 153
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPB (Glycogen synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23 Identity = 64/181 (35.36%), Postives = 105/181 (58.01%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L ++R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALVRQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.520e-23 Identity = 66/182 (36.26%), Postives = 104/182 (57.14%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 +HN+ +QG F +E GL+++ F F+ N + N +K G+ + ++ TVS YA+E+ + E G LD ++R+ + GI+NG+D ++WNP D YI +Y A+ + K L K LQ GLP ++P+ G + RL +QKG DILA AI + +VQ ++LG G +PW Sbjct: 173 VHNMQHQGNF-YE--GLMDVLGIGWEHFTFLGLENNG----EANLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRERAADLYGILNGVDYEDWNPEVDPYIAARYSAAD-LSGKKLCKRDLQRTFGLPERDDVPLFGMVSRLVKQKGVDILAEAIHRILALDVQFVMLGAG-EPW 344 HSP 2 Score: 26.1794 bits (56), Expect = 1.520e-23 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMY 96 A+DWHT+ IP + T Y Sbjct: 142 AHDWHTAAIPVLVNTTY 158 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |