FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.575e-23 Identity = 66/184 (35.87%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 P F +HN+A+QG+F E L LP S D ++ Y I +MK+G+ SD + TVSP YA E + G G+ LD ++R+ + GI+NG+D + WNP TDK I YD + A+ ++++ L +D + ++G I RL QKG D+L A+P + E +Q+ +LG G Sbjct: 159 PATVFTVHNLAFQGQFPRELLATLGLPPG-AFSVDGVEYYGS------IGYMKSGLQLSDRITTVSPAYALE-IQGPQAGMGLDGLLRQRAAQLTGILNGIDDKVWNPATDKRITATYDLDHLA-ARRANTQSVRELFDLSLDPDRLLLGVISRLSWQKGLDLLLEALPVLLAEGIQLALLGAG 333 HSP 2 Score: 24.6386 bits (52), Expect = 2.575e-23 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPK 105 A+DW L P YL+ KP+ Sbjct: 139 AHDWQAGLTPAYLRYSGKPQ 158
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLP8 (Glycogen synthase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glgA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.575e-23 Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 2 Query: 116 KVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD--FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 K K+ +HN+ QG F P F+ D DG + G IN + GI +D+V T SP YA+++ S + +D ++ K GI+NGMD ++WNP +DK I +Y A+ + K K+ L EVGLP PV+G I ++ +G +L ++ ++ ++Q+IV G+G K + L Sbjct: 170 KKVKIVQSVHNVYRQGVFQ---------PKMFQKHLDPEVFDGLER--EGDDINLLATGIKYADLVTTTSPSYAKQIASDPESSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQP-ELKLEDKKVLLEEVGLPFSEETPVVGVITTFDDVQGMGLLKESLSKLLELDLQLIVSGSGNKEFEQEL 353 HSP 2 Score: 31.9574 bits (71), Expect = 2.575e-23 Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 NDWH L+P +T Y +K K+V Sbjct: 148 NDWHAGLVPLLARTRYAKHDFFKKVKIV 175
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ALISL (Glycogen synthase OS=Aliivibrio salmonicida (strain LFI1238) GN=glgA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.575e-23 Identity = 61/179 (34.08%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV--MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 +HN ++G F ++D G L+ +FK+ + V I+ +KAG+ +D + VSP YA+EL++ G+ D R+ + GI+NG D EW+P TD +I ++ A+ + + K + K ALQ EVGLP + + + G + RL QKG L + F+K ++QI+++GTG Sbjct: 169 VHNAVFKGIFHYDDIGCLS---EFKTHYV----PEAAVSHTHISMLKAGVQCADKINAVSPTYAKELLTELGSHGMASDFQAREPDLFGILNGCDYSEWSPETDTFIPKQFKANRISMVRGKKVCKAALQEEVGLP-QKEVAMYGMVCRLTNQKGIHYLLPILEQFLKHDLQIVIVGTG 339 HSP 2 Score: 30.4166 bits (67), Expect = 2.575e-23 Identity = 13/32 (40.62%), Postives = 16/32 (50.00%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 V ANDWHT L+P LK Y + + V Sbjct: 135 VIHANDWHTGLLPYLLKKRYANDAYFSQVRSV 166
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.351e-23 Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL---VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLN 694 P F IHN+ Y+G F E L+ LP +S F I+G G ++ +KAGI+ + V TVSP YA E+ V G+ G+E R + GI+NG+D WNP TD Y+ D + K + K+ L+ +GL D + P+ G + R QKG D++ AA+P I Q+ +LG G ++LN Sbjct: 160 PPFLFSIHNMEYRGLFGPEILDLIGLP---RSQFS-INGLE--FHGL-VSTLKAGIVYAQAVATVSPSYAAEIKTPVGGQ--GLEGLLQARAGDLSGILNGIDSNAWNPQTDPYLAAPIDGADPAPGKRINKDMLKRRMGLDADGDRPLFGLVSRFVAQKGIDLVVAALPGMIAGGAQVAILGAGDTGLEAALN 344 HSP 2 Score: 23.483 bits (49), Expect = 3.351e-23 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V +DW T L+P YL Sbjct: 137 VLHGHDWQTGLVPAYL 152
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.351e-23 Identity = 64/188 (34.04%), Postives = 105/188 (55.85%), Query Frame = 2 Query: 134 FCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWR 682 F IHN+ +QG F ED LLNL ++ + D ++ Y +++MK ++ SD++ TVSP Y +E+ + G LD ++R + + GI+NG+D + +NP D ++ Y T + K L K ALQ + GLP ++P+I + R+ QKG D++ + E++Q++VLGTG WR Sbjct: 160 FTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYGC------VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTG--DWR 334 HSP 2 Score: 30.0314 bits (66), Expect = 3.351e-23 Identity = 11/33 (33.33%), Postives = 18/33 (54.55%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 V +DWHT ++P L+ Y+ + Y + VF Sbjct: 128 VIHCHDWHTGMVPFLLREQYRHELFYVDMRTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.351e-23 Identity = 64/188 (34.04%), Postives = 105/188 (55.85%), Query Frame = 2 Query: 134 FCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWR 682 F IHN+ +QG F ED LLNL ++ + D ++ Y +++MK ++ SD++ TVSP Y +E+ + G LD ++R + + GI+NG+D + +NP D ++ Y T + K L K ALQ + GLP ++P+I + R+ QKG D++ + E++Q++VLGTG WR Sbjct: 160 FTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYGC------VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTG--DWR 334 HSP 2 Score: 30.0314 bits (66), Expect = 3.351e-23 Identity = 11/33 (33.33%), Postives = 18/33 (54.55%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 V +DWHT ++P L+ Y+ + Y + VF Sbjct: 128 VIHCHDWHTGMVPFLLREQYRHELFYVDMRTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |