FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPG (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPE (Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_YERPA (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F +HN+AYQG F+ + L+LPA+F + ++ Y + I+++KAG+ +D V TVSP YA+E+ G+E L + R+ + GI+NG+D W+P +D + +YDA + AK + K LQ +GL + N P+ + RL QKG D++ A+P + Q++VLG+G Sbjct: 158 FTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ERWT9 (Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23 Identity = 63/185 (34.05%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT----GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 K F +HN+AYQG F + LP F D Y G+ I+++KAG+ +D V VSP YA+E+ E G ++ ++++ + GI+NG+D WNP D + +Y+ V+DAK K LQ +GL +D P+ + RL +QKG D++ A+P +++ Q++VLG G Sbjct: 155 KSVFTVHNLAYQGLFNARHMEQIQLP------HSFFDVYGMEFHGQ-ISYLKAGLFYADHVTAVSPTYAREITQPEF-GYGMEGLLKQRLLEGRLSGILNGVDPAIWNPAHDLLLAARYNRD-VLDAKRENKRQLQIAMGLKIDEKAPIFAVVSRLTKQKGLDLVLEALPGLLEQGGQLVVLGAG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTE (Glycogen synthase OS=Chlorobium tepidum GN=glgA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.359e-23 Identity = 61/194 (31.44%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 116 KVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 K K+ IHN+ QG F + F +L + + D + G ++N + GI +D+V T S YA++L+ + +D ++ G + GI+NGMD ++WNP +DK I +Y A + K K+ L EVGLP PV+G IG ++ +G++I+ A++ ++ ++Q+IV G+G K + +L Sbjct: 170 KKVKVVQTIHNVYRQGVFPSKAFQK-HLDPEVCDALD--------MEGGEVNLLATGIKHADLVTTTSDRYARQLLDDPELSFGMDKALKACGDRFHGILNGMDTRQWNPSSDKLIKKRYSAEQP-EMKLEDKKVLLEEVGLPFSEETPVVGVIGSFDQYQGAEIVKASLAKLLELDIQLIVFGSGDKEFDQAL 353 HSP 2 Score: 28.4906 bits (62), Expect = 4.359e-23 Identity = 11/28 (39.29%), Postives = 14/28 (50.00%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 +DWH L+ KT Y +K KVV Sbjct: 148 HDWHAGLVALLAKTRYAKHDFFKKVKVV 175
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_PARUW (Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23 Identity = 71/201 (35.32%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 107 GCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKY----------DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 676 G TK PK+ F IHN+ YQG+ A D + L F+ P IN +K GI+ SD V TVSP+YA+E+++ E +G+E + + KGI+NG+D WNP D+++ Y D +TV D K +K+ L+ ++ L + + P+IG I RL QKG D++ I H +++ Q I+LG+ P Sbjct: 155 GYTK-PKILFTIHNMEYQGKCAAHDLNYIGLDGNRYQQHSFMQDNLYP---HLINLLKGGIVYSDFVTTVSPNYAKEVLTPKEGRGLEATLVEYQHKFKGILNGIDYSYWNPEIDRFLPAHYSLREMPKNKKDRNTV-DKKGFIKKILREKLYL-AEEHRPIIGCITRLVPQKGIDLIKHTIRHIVEKKGQFILLGSSPIP 349
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.674e-23 Identity = 71/201 (35.32%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL--KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-KENVQIIVLGTGKKPWRSSLNSWR 703 K IHN+ +QG + + + ++ F D ++NW+K GI +D V TVSP YAQE + G LD ++R K GI+NG+D+Q ++P TD + Y A D KP K ALQ +GLPV +N+PV+ + RL +QKG D+L A+ F+ +++VQ+IVLGTG +L +++ Sbjct: 159 KTVLTIHNLQFQGVYDPIILDSLFRIGTETYTEAGVAFYD---------QVNWLKGGINFADAVNTVSPTYAQE-IQTPAFGERLDGVLRANRYKLSGILNGIDMQLYDPATDLALTANYSAK---DLKPKRQNKRALQRRLGLPV-KNMPVLAVVSRLTKQKGIDLLLDALNPFLQQQDVQLIVLGTGDPALERALRTYQ 345 HSP 2 Score: 27.335 bits (59), Expect = 5.674e-23 Identity = 12/28 (42.86%), Postives = 14/28 (50.00%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 NDWHT+ IP L Y Y+ K V Sbjct: 134 NDWHTAFIPVLLAEKYYWIEAYRDIKTV 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 7.382e-23 Identity = 64/185 (34.59%), Postives = 106/185 (57.30%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 F IHNI Y G ED +L L + S ++ ++ Y + ++ +KAGI ++ ++TVSP Y++E+ + E +G LD ++RK + GI+NG+D Q W+P TDK+I Y + M K K+AL E+G+ N PV G + RL QKG +++ A+P ++ + I+LG G++ + Sbjct: 161 FVIHNIGYLGYVPPEDASMLGLSNTYLS-YEGMEFYGQ------LSLLKAGIAYANKLVTVSPTYSREIQTTE-QGAGLDGLMRKRSQDLAGILNGVDFQVWSPETDKHIPCNYSTAD-MAGKGKCKKALLDEMGMDSQLMNAPVAGMVTRLFSQKGIELVIGAVPEIVENGMGFILLGNGEESY 336 HSP 2 Score: 26.5646 bits (57), Expect = 7.382e-23 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPK 105 V +ANDW T LIP + + P+ Sbjct: 134 VILANDWQTGLIPALMDQGHMPQ 156
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_NATTJ (Glycogen synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glgA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 9.601e-23 Identity = 67/198 (33.84%), Postives = 111/198 (56.06%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV--MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPWRSSLN 694 K IHN+ YQG F EDF L+ + + ++++ + + I+++K G++ SD + TVSP YA+E+ S E G+ +D ++ R+ + GI+NG+D Q++NP TD I Y+ + K + K LQ ++ LPV +P+I FI RL +QKG D++ +P ++ E VQ + LGTG + L+ Sbjct: 158 KTILTIHNLKYQGIFTPHVLEDFFDLH-DHKLQHDPEYLEYHGQ------ISFLKGGLIFSDAITTVSPTYAKEIQSPE-LGMGVDGLLHKRRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYVLPELLESEEVQFVFLGTGDPHYEQYLS 347 HSP 2 Score: 28.4906 bits (62), Expect = 9.601e-23 Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVV 132 NDWHT+++ LK Y K Y K + Sbjct: 133 NDWHTAMVSPLLKYKYAHKTNYNQMKTI 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23 Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIKENVQIIVLGTG 667 P F IHN+AYQG F F LNLP Q Y K++++K GI +D + TVSP YA+E+++ + +G LD ++ R + GI+NG+D +EW+P D+++ +Y A + K K ALQ LP IP++G +GR+ QKG D +L AA P Q++V+G+G Sbjct: 160 PATVFTIHNLAYQGLFPRHAFDALNLPPQLWH-------YQGLEFHGKLSFIKGGIGFADHITTVSPSYAREILTPQ-QGFGLDGLLNHRAGVLTGILNGVDYREWDPGKDRHLVARYSADD-LSGKARCKAALQHHFKLPCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQLVVVGSG 335 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |