FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ACHLI (Glycogen synthase OS=Acholeplasma laidlawii (strain PG-8A) GN=glgA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.544e-18 Identity = 60/184 (32.61%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPW 679 IHN+ YQG F + + F + FD+ + ++N++KAGI + + TVSP Y++E+++ E G LD + R GI+NG+D Q +NP TDKY+ Y S K L K+ L GL + + P+I ++GRL +QKG ++ + I+ N + I++G+G K + Sbjct: 162 IHNLQYQGDFDKD------VAKFFNTDFDYTY-----IHFDRVNYLKAGIERATKINTVSPTYSKEVMTRE-YGFSLDGSLQNRINDFSGILNGIDDQNTFNPKTDKYLIKTYSVSNHKSGKNLNKQFLLEHFGLDKNLDEPLIAYVGRLADQKGLGLMEYCLEEVIQYSNAKFILMGSGDKAY 333 HSP 2 Score: 24.2534 bits (51), Expect = 3.544e-18 Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYK 99 NDW TS+IP L Y+ Sbjct: 131 NDWQTSMIPYLLDKHYR 147
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18 Identity = 61/184 (33.15%), Postives = 96/184 (52.17%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 K F IHN+AYQG+F++ + LP + ++G +I+++K+G+ SD VSP YAQE+ + E G++ L + + + GI+NG+D W+P D+YI Y M K K LQA LP D + + RL EQKG D+L + +K+ Q+++LG+G Sbjct: 155 KSVFTIHNLAYQGQFSYHHLYEIGLP----TGMFHVEGLEL---FGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDRLVGILNGVDENIWHPNVDQYIPHHYKLK-YMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQGGQLMILGSG 330
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18 Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 T + PL L + P+G V + +HN+A+QG F + L + + G +++ +KAG+ +D + TVSP YA+E+ + E G LD ++R ++GI+NG+D WNP D I + A ++ K K AL+ +GL D + + G +GR+ EQKG D + +++ Q+ +LG+G S+L + Sbjct: 143 TALAPLYLRQFRDAAGPRG-DAVARSMVTVHNLAFQGVFPMDWAQRLGIEDRHL-------GIEGAEFWGQLSMLKAGLQYADAITTVSPTYAREIQTPE-LGFGLDGVLRARAGRLQGILNGIDTALWNPSQDTLIPAPFSADR-LEGKAACKAALRRTLGLAQDGDRMLFGLVGRMTEQKGIDWVIGGAERLLRQGGQLAILGSGDPALESALRA 349
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_PROM3 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=glgA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.604e-18 Identity = 59/189 (31.22%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPWRSSL 691 F IHN+ YQG + ++ + P + + M A +L +D V VSP YA+E+ + E G LD ++ ++GI+NG+D+Q+W+P DK + + A + + + K+ALQ +GL V+ + ++G + RL +QKG D+L + + QI+VLGTG++ SSL Sbjct: 149 FTIHNLKYQGPWRWKLDRMTWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAREICTSE-YGESLDGLLNYISGKLRGILNGIDLQDWDPANDKSLPATFSADD-LSGRAVNKQALQQRMGLEVNPDTYLLGMVSRLVDQKGVDLLLQVTERLLAYTDSQIVVLGTGERGLESSL 319 HSP 2 Score: 23.0978 bits (48), Expect = 4.604e-18 Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V +DWHT +IP ++ Sbjct: 124 VLHCHDWHTGMIPVWM 139
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHITR (Glycogen synthase OS=Rhizobium tropici GN=glgA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.608e-18 Identity = 60/178 (33.71%), Postives = 94/178 (52.81%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 IHNIA+QG+F + F L LPA S + I+ Y + ++K G+ + + TVSP YA+E+++ E G+ L+ +I + + GIVNG+D WNP TD I Y A+T+ + + + + + GL D P+ + RL QKG DILA + ++ +LG G Sbjct: 162 IHNIAFQGQFGADIFPGLRLPAH-AFSVEGIEYYGD------VGFLKGGLQTAHALTTVSPSYAEEILTPEF-GMGLEGVIASKAYNLYGIVNGIDADIWNPATDPMIAQTYSAATLKE-RAINRHRVVEHFGLEEDDG-PIFCVVSRLTWQKGMDILAEVASEVVHMGGKLAILGAG 329 HSP 2 Score: 23.483 bits (49), Expect = 4.608e-18 Identity = 7/20 (35.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPK 105 A+DW ++L+P Y++ P+ Sbjct: 136 AHDWQSALVPVYMRYYPTPE 155
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.608e-18 Identity = 63/189 (33.33%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPWRSSL 691 F IHN+AYQG + GLL P + N M A I ++ V TVSP YAQ++ + G +L+ ++ + GI+NG+D + +NP D++I +DA + +D + K A+Q E GL ++RN V+G + RL EQKG D++ + F+ + Q+I+LGTG + + + L Sbjct: 149 FTIHNLAYQGPWR----GLLETMTWC------------PWYMQGDNVMAAAIQFANRVTTVSPTYAQQIQTPA-YGEKLEGLLSYLSGNLVGILNGIDTEIYNPAEDRFISNVFDADS-LDKRVKNKIAIQEETGLEINRNAMVVGIVARLVEQKGIDLVIQILDRFMSYTDSQLIILGTGDRHYETQL 319 HSP 2 Score: 23.0978 bits (48), Expect = 4.608e-18 Identity = 7/25 (28.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 10 FSGPYGEDVVFVANDWHTSLIPCYL 84 F+ + + + +DWHT +IP ++ Sbjct: 115 FAWNHWKPEIIHCHDWHTGMIPVWM 139
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18 Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSWRY 706 F IHN+ YQGR+ + + S + ++ Y +N MKAG++ ++ V TVSP YA+E+ + GE L + + + GI+NG+D WNP TD I D + K L+AE GL + P++G + RL QKG D+L A+P + E ++VLG G ++L+ W Y Sbjct: 143 FTIHNLQYQGRWNLAEARTWTGLPDWTFSPEGVEFYGD------LNLMKAGLVFAEQVTTVSPTYAREITTPQYGEGLEGVLIRLALEGRLSGILNGLDQDRWNPRTDPDIRPYADPA----GKAANGSVLRAEFGLD---DAPILGVVSRLANQKGIDLLIEALPELV-ERWNVVVLGGGDPLLTAALHGWAY 322
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNJB (Glycogen synthase 1 OS=Synechococcus sp. GN=glgA1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.987e-18 Identity = 63/185 (34.05%), Postives = 103/185 (55.68%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDF---GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 ++ + IHN +QG E GL P F +D + P +N+MK GI+ S+ V TVSP++A E+ G D G L + + + +G++NG+D WNP D++I V+Y A T ++ K K+AL+ + L D + P++ +IGRL+EQKG ++ AI + +N Q ++LG+ Sbjct: 160 RVCYTIHNFKHQGFGGPEILWATGLNREPYYFH--YDRLRDNFNPF---SLNFMKGGIVFSNFVTTVSPNHALEVQFG-DYGYGLGHTLYLHRHKFRGVLNGIDYDIWNPEIDRFIPVRYTAQT-LENKAKNKKALRDRLLLQ-DVDKPIVAYIGRLDEQKGVHLVHHAIYRSLFKNAQFVLLGS 336 HSP 2 Score: 25.7942 bits (55), Expect = 5.987e-18 Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGM 111 +DW T L+P L +YK GM Sbjct: 136 HDWQTGLVPVLLFEIYKYHGM 156
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_BACHD (Glycogen synthase OS=Bacillus halodurans GN=glgA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.991e-18 Identity = 63/183 (34.43%), Postives = 99/183 (54.10%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-KENVQIIVLGTG 667 F IHN+ YQG F + F LL+ + + + +DG IN++K ++ SD V TVSP YAQE+ + GE L KT +GI+NG+D+++++P TD ++ Y + + K K+ +Q LP ++IP+I + RL E+KG +L + ENVQ+ +LGTG Sbjct: 156 FTIHNLRYQGAFPPDVFRELLHFAPEHFAGLE-MDG--------AINFLKGALVHSDRVTTVSPTYAQEIQTPAFGEGLHGLLHQERGKT--RGILNGIDLEDFDPKTDPHVTYPYKHNQMEKRKN--KQVIQRLFELPERKDIPLIAMVSRLVEEKGVPLLTQIAGELVTTENVQLAILGTG 325 HSP 2 Score: 25.0238 bits (53), Expect = 5.991e-18 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKT 90 +DW + LIP Y+KT Sbjct: 132 HDWQSGLIPAYMKT 145
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.787e-18 Identity = 62/191 (32.46%), Postives = 101/191 (52.88%), Query Frame = 2 Query: 107 GCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 G +P++ +HN+A+QG+F F L LPA+ S D ++ Y I ++K G+ +D + VSP YA+E++S G+ L+ ++ R + GIVNG+D++ W+P +D I Y A + P ++ L GLP D P+ + RL QKG D+LAA +K +I+ G G++ Sbjct: 152 GDDTIPRVL-TVHNLAFQGQFPAHYFPELGLPAE-AYSIDGVEYYGD------IGFLKGGLQAADAITVVSPTYAREIMSPAF-GMGLEGVMNERHADVVGIVNGIDLEVWDPSSDPCIEHHYSARVPLRRLPN-RQVLLRHFGLP-DTCGPIFASVNRLTWQKGMDLLAATAGEIVKNGGTLIIHGQGEE 331 HSP 2 Score: 21.1718 bits (43), Expect = 7.787e-18 Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLK 87 A+DWH ++ YLK Sbjct: 136 AHDWHAAMSLLYLK 149 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |