FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 T +LP+ L K G + + IHNIA+QGR +DF ++LP + F D PV G N AG+ +D +TVS Y E+ + D G L II ++GIVNG+D+ EWNP D+++ Y T+ K KEALQ ++GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LGTG+ Sbjct: 344 TALLPVYL---KAYYRDNGLMQYTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDHFRLYD----PVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKT-MDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGR 547
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.369e-28 Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 PK F IHN+A+QGRF +E G L LP + D I+ Y I ++KAG+ +D + TVSP YA E + G + G+ LD ++ R + GI+NG+D WNP +D I YD ++ A+ K+ LQA GL + + G I RL QKG D+L A+P I Q+ +LG+G Sbjct: 159 PKTVFTIHNLAFQGRFPYELLGRLGLPER-AFGLDGIEYYGG------IGYLKAGLQLADRITTVSPSYAAE-IQGSEAGMGLDGLLQLRADRLSGILNGIDTDVWNPASDALISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLQALPQLIGGGAQLALLGSG 333 HSP 2 Score: 28.8758 bits (63), Expect = 2.369e-28 Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 19 PYGEDVVFVANDWHTSLIPCYLKTMYKP 102 P+ + V A+DW T L+P YLK +P Sbjct: 130 PHYKPDVLHAHDWQTGLLPAYLKYSGRP 157
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.369e-28 Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 PK F IHN+A+QGRF +E G L LP + D I+ Y I ++KAG+ +D + TVSP YA E + G + G+ LD ++R + GI+NG+D WNP +D I YD ++ A+ K+ LQA GL + + G I RL QKG D+L A+P I Q+ +LG+G Sbjct: 159 PKTVFTIHNLAFQGRFPYELLGRLGLPER-AFGLDGIEYYGG------IGYLKAGLQLADRITTVSPTYAAE-IQGSEAGMGLDGLLRLRADRLSGILNGIDTDVWNPASDALISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLEALPQLIGGGAQLALLGSG 333 HSP 2 Score: 28.8758 bits (63), Expect = 2.369e-28 Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 19 PYGEDVVFVANDWHTSLIPCYLKTMYKP 102 P+ + V A+DW T L+P YLK +P Sbjct: 130 PHYKPDVLHAHDWQTGLLPAYLKYSGRP 157
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.085e-28 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 PK IHN+ YQG F F LP + K V+ N++K GI+ + + TVSP YA+E+ + E G LD +R + GI+NG+D E+NP TDK I V +D ++ ++ K K ALQ E+GLPV ++PVIG I RL EQKG D++ AA + ++Q +VLGTG++ + S Sbjct: 149 PKTLLTIHNLGYQGEFDKSYFYKTGLPEKLWQE-------GKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPE-YGAGLDETLRALSDRLFGILNGIDYSEYNPATDKRIPVNFDINS-LEKKKENKIALQKELGLPVI-DVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLGTGEERYERLFKS 332 HSP 2 Score: 26.9498 bits (58), Expect = 3.085e-28 Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMY--KPK 105 NDW +LIP Y+ Y KPK Sbjct: 130 NDWQPALIPAYISAFYNGKPK 150
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 66/195 (33.85%), Postives = 116/195 (59.49%), Query Frame = 2 Query: 101 PKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 P G + + IHN+A+QG + L LP ++ + +++ + +G +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G Sbjct: 294 PYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG 486
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 66/195 (33.85%), Postives = 116/195 (59.49%), Query Frame = 2 Query: 101 PKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 P G + + IHN+A+QG + L LP ++ + +++ + +G +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G Sbjct: 294 PYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG 486
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CLOB8 (Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.015e-28 Identity = 73/189 (38.62%), Postives = 109/189 (57.67%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRF----AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 K + IHNIA+QG F E FG ++ + F DG +++MK G+ SD++ TVS YA E+ + E G LD ++R+ ++GI NG+D E+NP TDK+I Y +++ D K + K LQ E+GL VD+NIP++ + RL QKG D+L ++ENVQ+++LGTG K Sbjct: 158 KCVYSIHNIAFQGVFDPQILPELFGF-DMELYNNTCLKFDDG---------VSYMKGGLCYSDVITTVSNTYAYEIQTPE-YGQRLDGVLRERSYALRGITNGIDYDEFNPKTDKFIKKNYSINSIED-KAINKTELQKELGLTVDKNIPMLAMVTRLTSQKGMDLLVNISDKLLQENVQLVILGTGDK 334 HSP 2 Score: 27.335 bits (59), Expect = 4.015e-28 Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMY 114 NDW T ++P LK YK M+ Sbjct: 132 NDWQTGMLPVLLKFEYKRNDMF 153
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRA5 (Glycogen synthase OS=Streptococcus agalactiae serotype V GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.016e-28 Identity = 74/181 (40.88%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F IHNI +QG+F E G L + A+ + DG + +NWMKA IL SD V TVSP YA E+ + E G LD I+R + GIVNG+D NP TD ++ + S ++ K K ALQ +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG Sbjct: 160 FTIHNIEFQGQFGPEMLGDLFGVGAE-----RYEDGTLR--WNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTG 331 HSP 2 Score: 26.5646 bits (57), Expect = 4.016e-28 Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 DV+ V +D+HT++IP LK Y Y + + VF Sbjct: 127 DVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRAVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRA3 (Glycogen synthase OS=Streptococcus agalactiae serotype III GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.016e-28 Identity = 74/181 (40.88%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F IHNI +QG+F E G L + A+ + DG + +NWMKA IL SD V TVSP YA E+ + E G LD I+R + GIVNG+D NP TD ++ + S ++ K K ALQ +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG Sbjct: 160 FTIHNIEFQGQFGPEMLGDLFGVGAE-----RYEDGTLR--WNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTG 331 HSP 2 Score: 26.5646 bits (57), Expect = 4.016e-28 Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 DV+ V +D+HT++IP LK Y Y + + VF Sbjct: 127 DVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRA1 (Glycogen synthase OS=Streptococcus agalactiae serotype Ia GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.016e-28 Identity = 74/181 (40.88%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F IHNI +QG+F E G L + A+ + DG + +NWMKA IL SD V TVSP YA E+ + E G LD I+R + GIVNG+D NP TD ++ + S ++ K K ALQ +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG Sbjct: 160 FTIHNIEFQGQFGPEMLGDLFGVGAE-----RYEDGTLR--WNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTG 331 HSP 2 Score: 26.5646 bits (57), Expect = 4.016e-28 Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 DV+ V +D+HT++IP LK Y Y + + VF Sbjct: 127 DVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRAVF 160 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |