FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 52/181 (28.73%), Postives = 90/181 (49.72%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 IHN+AYQG + L +PA+ + +F ++++++ GI+ +D V TVS YA++ ++G +G LD ++ K + GIVNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ Sbjct: 160 IHNLAYQGLVPYSMAAALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGALTGIVNGIDAS-WDPRTDQYLDSHFSVNQWQGRQANAAQVRKA-FGLRESAG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 327
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLAB (Glycogen synthase OS=Chlamydophila abortus GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 PK F IHN +Y+G + + G + S++ + V +K + SD + TVSP YAQ++++ D I+ R+ GI+NG+D WNP TD + V+Y + L K AL ++GL ++ + P++ I R+ EQKG + + AAI H ++ + +++ GT Sbjct: 151 PKRIFTIHNFSYRGYCSTQLLGASEISDFGLSNYQLFRDPSTSVL------LKGALYCSDYITTVSPSYAQDILNDYSDYEIHDAIMSRRHVFCGILNGIDENIWNPETDPALAVRYGTHLLKSPDVLFTKKEENKIALYEKLGLSLEYS-PLMCVISRIVEQKGPEFMKAAILHAMENSYALVIAGT 331
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTR (Glycogen synthase OS=Chlamydia trachomatis GN=glgA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.644e-13 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 110 CTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 C+++ K+ +HN Y+G E +L + S + V +K + SD V TVSP YA+E++ + E+ + I R+ ++GI+NG+D W P TD + Y S +AK K+AL +GL ++ + P + I R+ EQKG + AI H ++ +I++GT Sbjct: 148 CSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332 HSP 2 Score: 21.1718 bits (43), Expect = 1.644e-13 Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 25 GEDVVFVANDWHTSLIPCYLK 87 G ++V + +DWHT L+ LK Sbjct: 125 GANIVHL-HDWHTGLVAGLLK 144
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTB (Glycogen synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=glgA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.644e-13 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 110 CTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 C+++ K+ +HN Y+G E +L + S + V +K + SD V TVSP YA+E++ + E+ + I R+ ++GI+NG+D W P TD + Y S +AK K+AL +GL ++ + P + I R+ EQKG + AI H ++ +I++GT Sbjct: 148 CSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332 HSP 2 Score: 21.1718 bits (43), Expect = 1.644e-13 Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 25 GEDVVFVANDWHTSLIPCYLK 87 G ++V + +DWHT L+ LK Sbjct: 125 GANIVHL-HDWHTGLVAGLLK 144
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLT2 (Glycogen synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.644e-13 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 110 CTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 C+++ K+ +HN Y+G E +L + S + V +K + SD V TVSP YA+E++ + E+ + I R+ ++GI+NG+D W P TD + Y S +AK K+AL +GL ++ + P + I R+ EQKG + AI H ++ +I++GT Sbjct: 148 CSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332 HSP 2 Score: 21.1718 bits (43), Expect = 1.644e-13 Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 25 GEDVVFVANDWHTSLIPCYLK 87 G ++V + +DWHT L+ LK Sbjct: 125 GANIVHL-HDWHTGLVAGLLK 144
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLMU (Glycogen synthase OS=Chlamydia muridarum GN=glgA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 110 CTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKY------DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 C ++ K+ +HN Y+G E +L + S + V +K + SD V TVSP YA+E++ + E+ + I R+ +KGI+NG+D +P TD ++ Y D +AK K+AL +GL +D++ P + I R+ EQKG + + AI H ++ +I++GT Sbjct: 148 CPQLQKIVLTLHNFGYRGYTTREVLEASSLNEFYLSHYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILQ-DYSDYEIHDAITARQHHLKGILNGIDYTILDPETDPHLAKNYSKVLFEDPKAFFEAKAENKKALYETLGLSLDKS-PCMCIISRIAEQKGPEFMKQAILHALENAYTLIIIGT 332
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_RHOS4 (Glycogen synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glgA PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 58/188 (30.85%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQ--FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 +HNIA+QG L LP Q ++ ++ G + +KAG++ +D + TVSP YA EL+ E G+ L +I R + GI+NG+D W+P ++ YDA + + AK + L L V + ++ + RL QKG D++ +P FI + VLGTG P +++ Sbjct: 167 VHNIAFQGWAPASLLSALRLPPQEFHPAALEYYGGLSS---------LKAGLVSADHITTVSPTYACELMRPEF-GMGLQGVIAQRAGQVTGILNGVDTDIWSPEVEER---PYDAES-LKAKAENRAVLSGAFKLSVPGPLAIL--VSRLTYQKGIDLIPEVLPDFIAAGGGLAVLGTGDAPLEAAM 338
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_PROMP (Glycogen synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.773e-13 Identity = 54/189 (28.57%), Postives = 93/189 (49.21%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPWRSSL 691 F IHN+ YQG + ++ + P + M A +L +D V VSP YA E+ + E G L+ ++ ++GI+NG+D+ EW+P DK + +++ ++++ K LQ E+GL V+ ++G + RL +QKG D++ + + QI +LGTG + S L Sbjct: 149 FTIHNLKYQGPWRWKLEKMTWCPWYMHGD----------------HTMAAAMLYADRVNAVSPTYADEIKTHE-YGESLEGLLNYISGKLRGILNGIDLNEWDPDKDKVLPAQFNIKN-LESRLENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSRRLLAYTDSQIAILGTGDRSLESGL 319 HSP 2 Score: 23.0978 bits (48), Expect = 2.773e-13 Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYL 84 V +DWHT +IP ++ Sbjct: 124 VLHCHDWHTGMIPVWM 139
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTA (Glycogen synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=glgA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.774e-13 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 110 CTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 664 C+++ K+ +HN Y+G E +L + S + V +K + SD V TVSP YA+E++ + E+ + I R+ ++GI+NG+D W P TD + Y S +AK K+AL +GL ++ + P + I R+ EQKG + AI H ++ +I++GT Sbjct: 148 CSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAKNKKALYEILGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332 HSP 2 Score: 21.1718 bits (43), Expect = 2.774e-13 Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 25 GEDVVFVANDWHTSLIPCYLK 87 G ++V + +DWHT L+ LK Sbjct: 125 GANIVHL-HDWHTGLVAGLLK 144
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPN (Glycogen synthase OS=Chlamydia pneumoniae GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 52/189 (27.51%), Postives = 87/189 (46.03%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 K+ F IHN Y+G + + + S + V MK + SD + TVS Y QE+++ D I+ + + GI+NG+D WNP TD + V+YDAS + + L + L ++G+ D P+I I R+ E+KG + + I H ++ + I++GT + Sbjct: 152 KIVFTIHNFGYRGYCSTQLLAASQIDDFHLSHYQLFRDPQTSVL------MKGALYCSDYITTVSLTYVQEIINDYSDYELHDAILARNSVFSGIINGIDEDVWNPKTDPALAVQYDASLLSEPDVLFTKKEENRAVLYEKLGISSD-YFPLICVISRIVEEKGPEFMKEIILHAMEHSYAFILIGTSQ 333 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |