FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CLONN (Glycogen synthase OS=Clostridium novyi (strain NT) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27 Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = 2 Query: 125 KLFFCIHNIAYQGRFAFED-FGLLNLPAQFKSS--FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLN--SWRY 706 K + IHN+ YQGRF E + LL ++ S F + D I++MKAGI+ +D + TVSP YA+E+ + E G L+ ++ R + GI+NG+D NP TD ++ KYD + ++AK KE LQ + LP +R+IP+IG + RLEEQKG +++ I ++EN+Q++VLGTG + + +W+Y Sbjct: 158 KTVYTIHNLKYQGRFGKEILWELLGFGDEYFSEDKFKYYDS---------ISFMKAGIVYADAITTVSPTYAEEIKT-EYYGEGLNGLLQSRSKDLYGILNGIDTDVNNPSTDMFLFDKYDVNN-LEAKARNKEKLQEMLHLPKNRDIPMIGIVARLEEQKGFELIKEVIEELLQENIQLVVLGTGDQRYEDMFKFFAWKY 347 HSP 2 Score: 22.7126 bits (47), Expect = 1.153e-27 Identity = 10/33 (30.30%), Postives = 15/33 (45.45%), Query Frame = 1 Query: 37 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 V NDWHT++ L+ Y + K V+ Sbjct: 129 VLHCNDWHTAMTIPMLRDQYFNNPKLNNIKTVY 161
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 73/199 (36.68%), Postives = 115/199 (57.79%), Query Frame = 2 Query: 101 PKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 P G K + IHNIA+QG + L LP Q+ + ++I + G +N +K I +D +LTVS Y+ E+ + E G L ++ R++ + GI NG+DV +WNP TD++I Y + + K K LQ E+GLP+ + P+IGFIGRL+ QKG DI+ +AIP ++ +VQ+++LG+G+K + Sbjct: 293 PYGVYKDARSIVAIHNIAHQGVEPAVTYNNLGLPPQWYGAVEWIFPTWARAHALDTGETVNVLKGAIAVADRILTVSQGYSWEITTPEG-GYGLHELLSSRQSVLNGITNGIDVNDWNPSTDEHIASHYSIND-LSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPELMQNDVQVVMLGSGEKQY 489
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSS 688 F IHN+AYQG F + L LP + F+ + +F D ++++MKAG+ +D + TVSP YA+E+++ E G LD ++R + GI+NG+DV W+P D ++ + A + K K ALQ EVGLPV +PV G + RL EQKG D++AAA+P + +VQ+++LG+G ++ + Sbjct: 161 FTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFTAGDLA-GKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDPAYQET 338
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 72/182 (39.56%), Postives = 110/182 (60.44%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 F IHN+AYQG F + L LP + F+ + +F D ++++MKAG+ +D + TVSP YA+E+++ E G LD ++R + GI+NG+DV W+P D ++ + A + K K ALQ EVGLPV +PV G + RL EQKG D++AAA+P + +VQ+++LG+G Sbjct: 161 FTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFGAGD-LTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSG 331
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.544e-27 Identity = 70/188 (37.23%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 116 KVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 K K F +HN+AYQG F F L+LP F S + ++ Y + +++MKAG+ +D + TVSP YA+E+ S E +G L+ ++ R + G++NG+D Q WNP D I Y +T K K ALQA GL + V G + RL EQKG ++L AI Q+++LG+G K Sbjct: 161 KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIFLS-MNGLEFYGQ------VSFMKAGLYFADKITTVSPTYAKEIQSYE-QGCGLEGLLADRHNDLYGVLNGVDPQVWNPKKDTLIEANYSVTTANVGKAKCKTALQAMTGLAKKEDAVVFGIVTRLTEQKGLNLLIEAIGEITSRGGQVVLLGSGDK 340 HSP 2 Score: 28.8758 bits (63), Expect = 2.544e-27 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 ++DWH L+P Y+K G K+ K VF Sbjct: 139 SHDWHAGLVPAYIKASELASGK-KAVKTVF 167
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.544e-27 Identity = 74/192 (38.54%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 P F +HN+A+QG F G L LPA S+F IDG I ++KAG+ +D + TVSP YA E+ + +D G+ LD ++RK G + GI+NG+D WNP TD+++ +YD + + A+ + K A+QA +GL D + G + RL QKG D++ A+P Q+ VLGTG+ +SL Sbjct: 156 PPCVFTVHNLAFQGWFPAHLLGALGLPA---SAF-VIDGVEY---FGGIGFLKAGLQFADAITTVSPRYATEIAT-QDGGMGLDGLLRKRGSAVHGILNGLDTATWNPATDEHLAARYDVANLA-ARAVNKRAVQARMGLAPDPRALLFGVVSRLAGQKGIDLIIEALPVLDALGAQLAVLGTGETGIEASL 338 HSP 2 Score: 22.7126 bits (47), Expect = 2.544e-27 Identity = 7/13 (53.85%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 46 ANDWHTSLIPCYL 84 A+DW L+P YL Sbjct: 136 AHDWQAGLVPAYL 148
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 TG++P+ L T L + +K L IHN+ YQG F LP + + D I+ Y K IN++K GIL SD++ TVSP YAQE+ + E G +LD ++R + + GI+NG+D E+NP TDK I V Y + + K K+ LQ E+ LP ++PVIG I RL +QKG DIL+ + + + +VQ ++LGTG K + Sbjct: 142 TGLVPVYLKT--LYKDDEFFSKTVVLL-TIHNLGYQGIFDSSYMNFSGLP-DYLYNIDGIEFYGK------INFLKGGILFSDVINTVSPTYAQEIQTKE-YGEKLDGVLRLRSSDLYGILNGIDYDEYNPETDKRIYVNYSLQEI-EKKYENKKMLQKELNLPQTNDVPVIGMITRLVDQKGLDILSEVLRYILNMDVQFVLLGTGDKKY 340
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_STRE4 (Glycogen synthase OS=Streptococcus equi subsp. equi (strain 4047) GN=glgA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.312e-27 Identity = 71/194 (36.60%), Postives = 109/194 (56.19%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGYNK-PVRGRK-INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSW 700 F IHNIA+QG+F P FD I+ Y +R +NWMKA +L +D V TVSP YA E+ + G LD ++R + GIVNG+D +NP D ++ + A + K K+ALQ +GLPV ++P+IG + RL +QKG ++ +PH ++++VQ+++LGTG + ++ SW Sbjct: 160 FTIHNIAFQGQFD---------PGMLGDLFDVGIERYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHEIQTPAF-GQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAED-LSGKAATKQALQERLGLPVRADVPLIGMVSRLTDQKGFQLVLEELPHILQQDVQLVLLGTGDPDYEAAF-SW 341 HSP 2 Score: 26.5646 bits (57), Expect = 3.312e-27 Identity = 13/35 (37.14%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 D++ V +D+HT++IP LK Y Y++ + VF Sbjct: 127 DILHV-HDYHTAMIPFLLKEKYHWIQAYQAIRTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27 Identity = 77/220 (35.00%), Postives = 122/220 (55.45%), Query Frame = 2 Query: 56 GILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 G++P+ L P G K + IHN+A+QG + L LP+++ + ++ + G +N +K I+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++Q ++LG+G + S + S Sbjct: 292 GLVPILLAA---KYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRS 506
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.310e-27 Identity = 68/188 (36.17%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 116 KVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 K K F +HN+AYQG F F L+LP F S + ++ Y + +++MKAG+ +D + TVSP YA+E+ + E +G L+ ++ R + G++NG+D Q WNP D I Y ++TV K K ALQ +GL + + G + RL EQKG ++L AI Q+++LG+G K Sbjct: 161 KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIFLS-MNGLEFYGQ------VSFMKAGLYFADKITTVSPTYAKEIQTYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNPKKDSLIATNYSSTTVATGKAKCKLALQQMMGLAEKEDALLFGIVTRLTEQKGLNLLVEAIGEITSRGGQVVLLGSGDK 340 HSP 2 Score: 28.8758 bits (63), Expect = 4.310e-27 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 ++DWH L+P Y+K G K+ K VF Sbjct: 139 SHDWHAGLVPAYIKASELASGK-KAVKTVF 167 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |