FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 8.193e-86 Identity = 155/213 (72.77%), Postives = 176/213 (82.63%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 T +LP L K P G K K+ FCIHNIAYQGRFAF DF LNLP +FKSSFDFIDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+NGMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQKGSDI AAI ++ NVQI++LGTGKK + + Sbjct: 236 TALLPCYL---KAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQKGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQI 445 HSP 2 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 1 Query: 10 FSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 FSGPYGE+V F+ANDWHT+L+PCYLK +Y+P G+YK AKV F Sbjct: 219 FSGPYGEEVAFIANDWHTALLPCYLKAIYQPMGIYKHAKVAF 260
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.939e-80 Identity = 152/213 (71.36%), Postives = 167/213 (78.40%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 T +LP L K KG K+ FCIHNIAYQGRF DF LLNLP QFKSSFDF DGY KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGMD QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGSDIL AAI F+ +VQII+LGTGKK + + Sbjct: 236 TALLPCYL---KSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGMDTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGSDILVAAISKFVGLDVQIIILGTGKKKFEQQI 445 HSP 2 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 Query: 4 QYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 +YFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ KGMY AKV F Sbjct: 217 KYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSKGMYLHAKVAF 260
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 5.687e-79 Identity = 149/213 (69.95%), Postives = 169/213 (79.34%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 T ++P L K +G K+ FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGMD QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSDIL AAI FI +VQI+VLGTGKK + + Sbjct: 235 TALIPCYL---KSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMDTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKEFEQEI 444 HSP 2 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YFSGPYGEDV+F+ANDWHT+LIPCYLK+MY+ +G+Y +AKV F Sbjct: 217 YFSGPYGEDVLFIANDWHTALIPCYLKSMYQSRGIYLNAKVAF 259
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 3.686e-78 Identity = 148/213 (69.48%), Postives = 166/213 (77.93%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 T +LP L K +G K+ FCIHNIAYQGRFAF DF LLNLP ++K SFDFIDGY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI NGMD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKGSDIL AAI FI +VQI++LGTGKK + + Sbjct: 236 TALLPCYL---KTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFIDGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNGMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKGSDILYAAISKFISMDVQILILGTGKKKFEQQI 445 HSP 2 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YFSGPYGEDVVFVANDWHT+L+PCYLKTMY+ +G+Y +AKV F Sbjct: 218 YFSGPYGEDVVFVANDWHTALLPCYLKTMYQSRGIYMNAKVAF 260
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 6.288e-78 Identity = 142/190 (74.74%), Postives = 160/190 (84.21%), Query Frame = 2 Query: 104 KGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 +G K K+ FCIHNIAYQGR AF DF LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+GVELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLPVD +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK Sbjct: 245 RGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRGVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPVDSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKK 434 HSP 2 Score: 84.7297 bits (208), Expect = 5.240e-16 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 1 Query: 4 QYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 +YFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV F Sbjct: 212 KYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAF 255
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 9.080e-77 Identity = 141/213 (66.20%), Postives = 166/213 (77.93%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 T +LP L K +G K+ FCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DGY KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGMDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGSDIL AI F+ NVQ+++LGTGKK + + Sbjct: 238 TALLPCYL---KSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQI 447 HSP 2 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 1 Query: 4 QYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 +YFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ +G+Y +AKVVF Sbjct: 219 KYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVF 262
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.506e-76 Identity = 144/215 (66.98%), Postives = 168/215 (78.14%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 TG LP L K P G + K+ FCIHNI+YQGRFAFED+ LNL +FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR +P+I FIGRLEEQKG D++AAAIP ++ENVQI++LGTGKK + L S Sbjct: 234 TGPLPSYL---KNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLIAFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKS 445 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YF G YGEDVVFV NDWHT +P YLK Y+P G+Y++AKV F Sbjct: 216 YFKGTYGEDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAF 258
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.004e-75 Identity = 139/197 (70.56%), Postives = 161/197 (81.73%), Query Frame = 2 Query: 107 GCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNS 697 G K K FCIHNI+YQGRFAF DF LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDR IP++ FIGRLEEQKG D++AAAIP ++E++QI++LGTGKK + L S Sbjct: 251 GIYKDAKTAFCIHNISYQGRFAFSDFPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRKIPLVAFIGRLEEQKGPDVMAAAIPLLMEEDIQIVLLGTGKKKFERMLMS 447 HSP 2 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YFSGPYGEDVVFV NDWHT + CYLK+ Y+ G+YK AK F Sbjct: 218 YFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSNGIYKDAKTAF 260
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74 Identity = 139/199 (69.85%), Postives = 162/199 (81.41%), Query Frame = 2 Query: 107 GCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPWRSSLNS 697 G + K FCIHNI+YQGRFAF D+ LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDRNIP++ FIGRLEEQKG D++AAAIP ++ E+VQI++LGTGKK + L S Sbjct: 246 GIYRDAKTAFCIHNISYQGRFAFSDYPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSRDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRNIPLVAFIGRLEEQKGPDVMAAAIPQLMEMVEDVQIVLLGTGKKKFERMLMS 444 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YFSGPYGEDVVFV NDWHT + CYLK+ Y+ G+Y+ AK F Sbjct: 213 YFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSHGIYRDAKTAF 255
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.110e-74 Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPWRSSLNS 697 TG+L L K G + K+ FCIHNI+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK + L S Sbjct: 230 TGLLACYL---KSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKS 442 HSP 2 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1 Query: 7 YFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV F Sbjct: 212 YFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAF 254 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |