FC930012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 72/178 (40.45%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 160 TMKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE--PSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 T KA+ILVGG GTR RPL+L VPK L A KPMI H IEA V + E++L +Q V+ F+ E +L + I E + LGTAG L RD +++ FVL+SD+ +P ++++FHK HG +IM T+++ ++YG +V +E T ++ + EKP FV N I Sbjct: 5 TTKAIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEEKVLGTAGGLYHFRDIILEGGPSEIFVLHSDICCAFPLNDLLQFHKQHGRSCTIMGTEIESAYANQYGCLVRDEKTAELLHYAEKPETFVSNLI 182
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26 Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PM+ H IEA V + E++L YQP LN FL + + + + I QE LGT G + RD+++ + FFV+N+DV SE+P M++FHK HGG S ++ + YG +V T +V +VEKP FV + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVSMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVANRDTQEVLHYVEKPGTFVSDII 181
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 71/180 (39.44%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PM+ H IEA V + E++L YQP E + +FL + + + + I QE LGT G + RD+++ + FFV+N+DV SE+P M++FHK HGG S ++ + YG +V+ T +V +VEKP FV + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVPMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVSNGDTQEVLHYVEKPGTFVSDII 181
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PM+ H IEA V + E++L YQP E + +FL + + + + I QE LGT G + RD+++ + FFV+N+DV S +P M++FHK HGG S ++ + YG +V T +V +VEKP FV + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVILGTTANRSQSLNYGCIVANGETQEVLHYVEKPGTFVSDII 181
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 74/180 (41.11%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEAL-KAVGVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK----YGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PM+ H IEA K + E++L YQP LN FL + I I QE LGT G + RD+++ + FFV+N+DV SE+P EM++F K HG S ++ K YG +V E T +V +VEKP FV + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQEYAALGTGGGIYHFRDQILSGGPDAFFVMNADVCSEFPLPEMLDFQKEHGDTYSFVILGTTANRKQSLNYGCIVENEQTDEVLHYVEKPGTFVSDII 181
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PMI H IEA V G+ E++L YQP E + FL+ + + + + QE PLGT G L RD+++ E FFVLN+DV S++P + M+E H+ ++ T + + YG +V T +V +VEKP F+ + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDII 179
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PMI H IEA V G+ E++L YQP E + FL+ + + + + QE PLGT G L RD+++ + E FFVLN+DV S++P + M+E H+ ++ T + + YG +V T +V +VEKP F+ + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDII 179
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PMI H IEA V G+ E++L YQP E + FL+ + + + + QE PLGT G L RD+++ + E FFVLN+DV S++P + M+E H+ ++ T + + YG +V T +V +VEKP F+ + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDII 179
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 69/178 (38.76%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PMI H IEA V G+ E++L YQP E + FL+ + + + + QE PLGT G L RD+++ E FFVLN+DV S++P + M++ H+ ++ T + + YG +V T +V +VEKP F+ + I Sbjct: 2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFTPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLDAHRLQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDII 179
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 71/180 (39.44%), Postives = 97/180 (53.89%), Query Frame = 1 Query: 163 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHG----GEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678 +KA+IL+GG GTR RPL+ VPKPL A PM+ H IEA V + E++L YQP LN F+ + + I I QE LGT G + RD+++ FF++N+DV SE+P EM++FH+ HG G + YG +V T +V FVEKP FV + I Sbjct: 2 LKAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKPSTFVSDII 181 The following BLAST results are available for this feature:
BLAST of FC930012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930012 ID=FC930012; Name=FC930012; organism=Citrus clementina; type=EST; length=699bpback to top |