FC930016

Overview
NameFC930016
Unique NameFC930016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:192..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_MOUSE (Inositol monophosphatase 1 OS=Mus musculus GN=Impa1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.687e-37
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ AA   T  T+ PTW +DP+DGTTNFVH FPFV +SIG  + K    G+VY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   TL
Sbjct:    3 DPWQECMDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPCHSFIGEESVAAGEKTVFTESPTWFIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIVYSCVEDKMYTGRKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRKPETL 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA2_HUMAN (Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37
Identity = 79/161 (49.07%), Postives = 105/161 (65.22%), Query Frame = 3
Query:  159 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE  A+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+Y+   + L+TG  G+GAF NG+ ++VS +T+L K+L+ TE G KRD  TL
Sbjct:   23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATL 183          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_PONAB (Inositol monophosphatase 1 OS=Pongo abelii GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37
Identity = 77/170 (45.29%), Postives = 111/170 (65.29%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A++AGE++        NV  K   VDLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ +  +++T   G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+
Sbjct:    3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETV 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_HUMAN (Inositol monophosphatase 1 OS=Homo sapiens GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37
Identity = 77/170 (45.29%), Postives = 111/170 (65.29%), Query Frame = 3
Query:  132 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTL 638
            D   + +D AV  A++AGE++        NV  K   VDLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ +  +++T   G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+
Sbjct:    3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETV 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_DICDI (Inositol monophosphatase OS=Dictyostelium discoideum GN=impa1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.401e-36
Identity = 77/167 (46.11%), Postives = 110/167 (65.87%), Query Frame = 3
Query:  126 QNDSLAKFLDTAVDAAKRAGE-IIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKR 623
            +N +L ++L +AVD  K  G  I++N   ++K +E+KG +DLVT+TDKA E+ I   L  ++P  K +GEE+T   G     +EPTW++DP+DGTTNFVH FP  C+SI L+I K  +V  +Y P++DELFT   G GAF NG+ I VSS   L +S+++T  G  R
Sbjct:    2 ENITLDQYLQSAVDVVKEIGPMILKNYNSRSKQIEYKGAIDLVTDTDKAVEEHIIKTLTTKYPHTKILGEESTKD-GIYNWGNEPTWVIDPIDGTTNFVHRFPLFCVSIALSINKEIVVACLYAPVLDELFTATKGGGAFLNGESISVSSVEHLSQSIISTNVGYDR 167          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_XENLA (Inositol monophosphatase 1 OS=Xenopus laevis GN=impa1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 3
Query:  159 AVDAAKRAGEIIRNGFYQTKNVEHKGQV---DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRD 626
            AV  A++AG ++     +  ++  K  +   DLVT TD+  E++I + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ + D+++TG  G+G+F NG+ ++VS Q ++ KS++ TE G+ R+
Sbjct:   13 AVSIARKAGSVVCAALKEDVSIMVKTSLAPADLVTATDQKVEEMIISSIKEKYPSHSFIGEESVAAGAGSTLTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVHKQVEFGVVYSCVEDKMYTGRKGKGSFCNGQKLQVSGQKDITKSMIITELGSNRN 171          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPA1_CAEEL (Inositol monophosphatase ttx-7 OS=Caenorhabditis elegans GN=ttx-7 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.219e-33
Identity = 72/158 (45.57%), Postives = 96/158 (60.76%), Query Frame = 3
Query:  147 FLDTAVDAAKRAGEIIRNGFY--QTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAG 614
            F+D A++  K+AG ++R  F   ++K        DLVTETD+A E L+   L ++F  H+FIGEE+ A     E TD PTWI+DP+DGTTNFVH  P + I +GL I K    G+VYNPI +EL+    G+GAF NG PI+ S    L K +L    G
Sbjct:   13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHRFIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPITNELYLAQLGKGAFKNGFPIRASKNQLLSKGVLCQSLG 170          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: INM1_YEAST (Inositol monophosphatase 1 OS=Saccharomyces cerevisiae GN=INM1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 78/190 (41.05%), Postives = 113/190 (59.47%), Query Frame = 3
Query:  135 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKG---QVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTE------LVKSLLATEAGTKRDK---PTLDASTNRIIAC 668
            S+ KFL     A ++ G II++     K+ + K     VD+VT  DK  E LI+  +K Q+PT KFIGEE+    G T +TD+PT+I+DP+DGTTNFVH FPF C S+GLT+ K P+VGV+YNP ++ L +   G G   N K     S+ E      L KS++A + G+ R+     T  A+  ++++C
Sbjct:    7 SIEKFLCEL--ATEKVGPIIKSKSGTQKDYDLKTGSRSVDIVTAIDKQVEKLIWESVKTQYPTFKFIGEESYVK-GETVITDDPTFIIDPIDGTTNFVHDFPFSCTSLGLTVNKEPVVGVIYNPHINLLVSASKGNGMRVNNKDYDYKSKLESMGSLILNKSVVALQPGSAREGKNFQTKMATYEKLLSC 193          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: INM2_YEAST (Inositol monophosphatase 2 OS=Saccharomyces cerevisiae GN=INM2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.696e-29
Identity = 65/129 (50.39%), Postives = 91/129 (70.54%), Query Frame = 3
Query:  240 VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELV-KSLLATEAGTKR 623
            VDLVT  DK  E +I  +L  ++P+ KFIGEET    G T++T+ PT+IVDP+DGTTNF+HG+P+ C S+GL     P+VGVV+NP +++LF    G GAF N + IKVS +  ++ KSL+A E G++R
Sbjct:   45 VDLVTALDKQIESIIKENLTAKYPSFKFIGEETYVK-GVTKITNGPTFIVDPIDGTTNFIHGYPYSCTSLGLAEMGKPVVGVVFNPHLNQLFHASKGNGAFLNDQEIKVSKRPLILQKSLIALEGGSER 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_SYNY3 (Inositol-1-monophosphatase OS=Synechocystis sp. (strain PCC 6803) GN=suhB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27
Identity = 73/170 (42.94%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  138 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQV-DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEP-TWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLD 641
            L  +L+ A +A   AG  I + + + + ++ KG+  DLVTE D+  E +I   +K++ P H  + EE+    G     D P  W +DPLDGTTNF H +P  C+SIGL I  IP VGVVYNP   ELF      GA  N +PI+VS+   L KSLL T     R K TLD
Sbjct:   14 LQTWLEIATEAVLAAGAEIFSLWGKVQQIQEKGRAGDLVTEADRQAEAIILEIIKRRCPDHAILAEES----GQLGQVDNPFCWAIDPLDGTTNFAHSYPVSCVSIGLLIQDIPTVGVVYNPFRQELFRAATSLGATLNRRPIQVSTTASLDKSLLVTGFAYDRVK-TLD 178          
The following BLAST results are available for this feature:
BLAST of FC930016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
IMPA1_MOUSE3.687e-3745.29Inositol monophosphatase 1 OS=Mus musculus GN=Impa... [more]
IMPA2_HUMAN4.816e-3749.07Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA... [more]
IMPA1_PONAB4.816e-3745.29Inositol monophosphatase 1 OS=Pongo abelii GN=IMPA... [more]
IMPA1_HUMAN4.816e-3745.29Inositol monophosphatase 1 OS=Homo sapiens GN=IMPA... [more]
IMPA1_DICDI1.401e-3646.11Inositol monophosphatase OS=Dictyostelium discoide... [more]
IMPA1_XENLA1.186e-3544.03Inositol monophosphatase 1 OS=Xenopus laevis GN=im... [more]
IMPA1_CAEEL4.219e-3345.57Inositol monophosphatase ttx-7 OS=Caenorhabditis e... [more]
INM1_YEAST1.270e-2941.05Inositol monophosphatase 1 OS=Saccharomyces cerevi... [more]
INM2_YEAST3.696e-2950.39Inositol monophosphatase 2 OS=Saccharomyces cerevi... [more]
SUHB_SYNY32.649e-2742.94Inositol-1-monophosphatase OS=Synechocystis sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC34002H05EF PostHarvC1 Citrus clementina cDNA clone C34002H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930016 ID=FC930016; Name=FC930016; organism=Citrus clementina; type=EST; length=673bp
GAGCTCAAAACGAAGCACAACCTGTCATTACCACCATCATCACTCATCAG
CTCGCTGTCCCTTCTCTTCTCGTTCTTCTCTTTAATTTTTTAATCCTGTA
TAATAAAAAATATACCCATATGGCACAAAATGATTCGCTTGCAAAGTTCT
TGGACACTGCAGTTGATGCAGCTAAGAGGGCTGGCGAGATAATCCGTAAT
GGGTTCTATCAAACCAAAAATGTGGAGCATAAAGGCCAGGTGGATTTGGT
CACAGAAACTGATAAAGCATGTGAGGATCTCATATTTAATCATCTCAAGC
AGCAATTTCCCACGCATAAGTTCATTGGAGAAGAAACTACCGCTGCTTGT
GGTGCCACAGAGTTGACCGATGAACCCACATGGATTGTCGATCCTCTTGA
TGGAACAACTAACTTTGTGCATGGGTTTCCCTTTGTGTGTATCTCTATCG
GTCTTACAATTGGAAAGATTCCTATTGTCGGGGTTGTCTACAATCCAATA
ATGGATGAGCTTTTTACTGGAGTCCATGGACAAGGTGCATTTTTTAATGG
AAAACCTATAAAAGTATCATCTCAAACTGAACTAGTAAAGTCTCTCCTCG
CAACAGAGGCTGGAACAAAACGTGATAAGCCAACTCTGGATGCTTCTACA
AATAGAATCATAGCTTGCTATTC
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