FC930016

Overview
NameFC930016
Unique NameFC930016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_VIBCH (Inositol-1-monophosphatase OS=Vibrio cholerae GN=VC_0745 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            L+ A+ AA++AG  I       + ++   KG  D VT  DK  E +I + +K  +P H  I EE     G  +   E  WI+DPLDGTTNFV GFP   +SI +       V  VY+P+ +ELFT   G GA  N   I+V    +L  ++LAT
Sbjct:    5 LNIAIRAARKAGNHIAKSLENAEKIQTTQKGSNDFVTNVDKEAEAIIVSTIKSSYPEHCIIAEEGGLIEGKDK---EVQWIIDPLDGTTNFVKGFPHFAVSIAVRFRGKTEVACVYDPMTNELFTAQRGAGAQLNNARIRVQPIKDLQGAVLAT 155          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_RHIME (Inositol-1-monophosphatase OS=Rhizobium meliloti GN=suhB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20
Identity = 57/154 (37.01%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKN--VEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            L+  V A  +AG+ +   F + +N  V  KG  D V++ D+  E +I   L +  PT+ F+GEE     G         WIVDPLDGTTNF+HG P   IS+ L      +  VV+NP  DEL+T   G GAF N + ++V ++  L  +++ T
Sbjct:    7 LNVMVQAVFKAGKSLARDFGEVQNLQVSLKGPADYVSQADRKAERIIREELMKARPTYGFLGEEGEEIKGTD---GAHRWIVDPLDGTTNFLHGIPHFAISVALERQGEIVGAVVFNPATDELYTAERGGGAFLNDRRLRVGARKALSDAVIGT 157          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFA (Inositol-1-monophosphatase OS=Xylella fastidiosa GN=suhB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  162 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  CISI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L  ++L T
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPEYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCISIALVENGEPTDAVIFDPLRNELFTASRGAGAILNERKIRVANRKDLNGTMLNT 154          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: QAX_NEUCR (Protein QA-X OS=Neurospora crassa GN=qa-x PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 3
Query:  225 EHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELT-----DEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFN 548
            E    VD+VT+TD+  E  I + +  ++P+H FIGEET A    +          PTW+VDPLDGT N+ H FP  C+SI   +   P++GV+  P++ +LFT   G+GA+ N
Sbjct:   55 EKDSAVDIVTQTDEDVEAFIKSAINTRYPSHDFIGEETYAKSSQSTRPYLVTHTTPTWVVDPLDGTVNYTHLFPMFCVSIAFLVDGTPVIGVICAPMLGQLFTACKGRGAWLN 167          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFT (Inositol-1-monophosphatase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=suhB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20
Identity = 50/150 (33.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  162 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  C+SI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L  ++L T
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNT 154          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPL1_ARATH (Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana GN=IMPL1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19
Identity = 59/170 (34.71%), Postives = 86/170 (50.59%), Query Frame = 3
Query:  135 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIP----IVGVVYNPIM--DELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRD 626
            S A  L+    AAK   E++     + +N+ +KG  DLVT+TDKA E  I   +K+ F  H  +GEE        + + +  W +DPLDGTTNF HG+P   +S+G+     P    +V  V  P+      F+   G GA  NG+ I VS    + ++LL T  G + D
Sbjct:   83 SPAHLLEVVELAAKTGAEVVMEAVNKPRNITYKGLSDLVTDTDKASEAAILEVVKKNFSDHLILGEEGGI---IGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGNPAAASVVEFVGGPMCWNTRTFSATAGGGALCNGQKIHVSKTDAVERALLITGFGYEHD 249          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_CAUCR (Inositol-1-monophosphatase OS=Caulobacter crescentus GN=suhB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  162 VDAAKRAGEIIRNGFYQTKN--VEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEP-TWIVDPLDGTTNFVHGFPFVCISIGL-TIGKIPIVGVVYNPIMDELFTGVHGQGAFFNG-KPIKVSSQTELVKSLLAT 605
            ++AA++A   +   F +     V  KG  D VT  D   E  +F  L +  P + F+GEE     G  E TD+  TWIVDPLDGTTNF+H  P   ++I L   G+  + GV YNPI ++LF    G+GAF    K ++V+++  L +++LAT
Sbjct:    2 IEAARKAARGLARDFGEVTELQVSKKGAADFVTNADIKAEQTLFELLTKARPGYGFLGEER----GMVEGTDKTHTWIVDPLDGTTNFMHAIPHFAVNIALQREGEGIVAGVTYNPITNDLFWVEKGKGAFLGAEKRLRVAARRHLDEAILAT 150          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_NEIMB (Inositol-1-monophosphatase OS=Neisseria meningitidis serogroup B GN=suhB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 3
Query:  147 FLDTAVDAAKRAGEIIRN--GFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            FL+TA  AA+RAG+++    G       + K   D V++ D+  E ++   LK+ +P HK   EE+ +   A     E  WI+DPLDGTTNF+HG P   IS+ L    +    +VY P  ++++    G+GA  N + I+VS++ EL + L+ T
Sbjct:    4 FLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVDRNSEIILVEALKEAYPHHKITCEESGSHGKAAA---EYEWIIDPLDGTTNFLHGHPQYAISMALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGT 155          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_NEIMA (Inositol-1-monophosphatase OS=Neisseria meningitidis serogroup A GN=suhB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 3
Query:  147 FLDTAVDAAKRAGEIIRN--GFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            FL+TA  AA+RAG+++    G       + K   D V++ D+  E ++   LK+ +P HK   EE+ +   A     E  WI+DPLDGTTNF+HG P   IS+ L    +    +VY P  ++++    G+GA  N + I+VS++ EL + L+ T
Sbjct:    4 FLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVDRNSEIILVEALKEAYPHHKITCEESGSHGKAAA---EYEWIIDPLDGTTNFLHGHPQYAISMALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGT 155          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_THEMA (Inositol-1-monophosphatase OS=Thermotoga maritima GN=suhB PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            LD ++   ++ G ++   + +  NVE K G  D+VTE D+  + +I + +++ FP    + EE     G  E  D   WI+DP+DGT NFVHG P   IS+         +GVV+ P ++E      G GAFFNG+ I+VS    L + + +T
Sbjct:    4 LDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEE-----GIFEKGDR-LWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYAEEGSGAFFNGERIRVSENASLEECVGST 150          
The following BLAST results are available for this feature:
BLAST of FC930016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SUHB_VIBCH1.408e-2038.31Inositol-1-monophosphatase OS=Vibrio cholerae GN=V... [more]
SUHB_RHIME1.839e-2037.01Inositol-1-monophosphatase OS=Rhizobium meliloti G... [more]
SUHB_XYLFA4.096e-2034.00Inositol-1-monophosphatase OS=Xylella fastidiosa G... [more]
QAX_NEUCR4.096e-2040.71Protein QA-X OS=Neurospora crassa GN=qa-x PE=3 SV=... [more]
SUHB_XYLFT6.987e-2033.33Inositol-1-monophosphatase OS=Xylella fastidiosa (... [more]
IMPL1_ARATH2.033e-1934.71Phosphatase IMPL1, chloroplastic OS=Arabidopsis th... [more]
SUHB_CAUCR5.915e-1938.56Inositol-1-monophosphatase OS=Caulobacter crescent... [more]
SUHB_NEIMB1.318e-1835.48Inositol-1-monophosphatase OS=Neisseria meningitid... [more]
SUHB_NEIMA1.318e-1835.48Inositol-1-monophosphatase OS=Neisseria meningitid... [more]
SUHB_THEMA1.115e-1734.64Inositol-1-monophosphatase OS=Thermotoga maritima ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34002H05EF PostHarvC1 Citrus clementina cDNA clone C34002H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930016 ID=FC930016; Name=FC930016; organism=Citrus clementina; type=EST; length=673bp
GAGCTCAAAACGAAGCACAACCTGTCATTACCACCATCATCACTCATCAG
CTCGCTGTCCCTTCTCTTCTCGTTCTTCTCTTTAATTTTTTAATCCTGTA
TAATAAAAAATATACCCATATGGCACAAAATGATTCGCTTGCAAAGTTCT
TGGACACTGCAGTTGATGCAGCTAAGAGGGCTGGCGAGATAATCCGTAAT
GGGTTCTATCAAACCAAAAATGTGGAGCATAAAGGCCAGGTGGATTTGGT
CACAGAAACTGATAAAGCATGTGAGGATCTCATATTTAATCATCTCAAGC
AGCAATTTCCCACGCATAAGTTCATTGGAGAAGAAACTACCGCTGCTTGT
GGTGCCACAGAGTTGACCGATGAACCCACATGGATTGTCGATCCTCTTGA
TGGAACAACTAACTTTGTGCATGGGTTTCCCTTTGTGTGTATCTCTATCG
GTCTTACAATTGGAAAGATTCCTATTGTCGGGGTTGTCTACAATCCAATA
ATGGATGAGCTTTTTACTGGAGTCCATGGACAAGGTGCATTTTTTAATGG
AAAACCTATAAAAGTATCATCTCAAACTGAACTAGTAAAGTCTCTCCTCG
CAACAGAGGCTGGAACAAAACGTGATAAGCCAACTCTGGATGCTTCTACA
AATAGAATCATAGCTTGCTATTC
back to top