FC930016

Overview
NameFC930016
Unique NameFC930016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_BACSU (Inositol-1-monophosphatase OS=Bacillus subtilis GN=suhB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 3
Query:  174 KRAGEIIRNGFYQTKNVEHKGQV-DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDAS 647
            + AG  I    +++  +E K    DLVT  DK  E    + +++ FP H+ +GEE           +   WI+DP+DGT NFVH      ISIG+       +G++Y+ + DEL+    G+GA+ N   +    +T + +++LA  A    +   +D S
Sbjct:   16 REAGARITQSMHESLTIETKSNPNDLVTNIDKETEKFFIDRIQETFPGHRILGEEGQG--DKIHSLEGVVWIIDPIDGTMNFVHQQRNFAISIGIFENGEGKIGLIYDVVHDELYHAFSGRGAYMNETKLAPLKETVIEEAILAINATWVTENRRIDQS 172          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: Y733_CHLP8 (Uncharacterized protein Cpar_0733 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0733 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGF-YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-----WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTE-LVKSLLATEAGTKRDKPT 635
            L  A++ A++AG++  + F  ++  V  K     VTE D+  E+LI   +  +FP     GEE           + P+     WI+DP+DGT +F+HG P   + I L +     +GV+  P + EL+    G GAF NG P++VS+  E    +++ TE     D P+
Sbjct:    5 LQLALELAEKAGKLTLDYFGRRSLQVFSKRDDTPVTEADRNAEELIRQGISAKFPDDGLFGEE---------FDEHPSGNGRRWIIDPIDGTRSFIHGVPLYGVMIALEVEGAMQLGVINFPALGELYQAERGSGAFMNGSPVQVSAIAENSASTVVFTEKEYLLDPPS 164          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: IMPL2_ARATH (Phosphatase IMPL2, chloroplastic OS=Arabidopsis thaliana GN=IMPL2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  129 NDSLAKFLDTAVDA--------AKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLAT 605
            N+S ++  DT +D         A  +GE+IR  F +  ++  K  +  VT  D+  E+ + + + Q  P+H   GEE    C   E + +  W++DP+DGT +F+ G P     I L     PI+G++  PI+ E + G++G+    NG+ I   S  +L ++ L T
Sbjct:   72 NESPSELSDTELDRFAAVGNALADASGEVIRKYFRKKFDIVDKDDMSPVTIADQMAEEAMVSIIFQNLPSHAIYGEEKGWRC--KEESADYVWVLDPIDGTKSFITGKPVFGTLIALLYKGKPILGLIDQPILKERWIGMNGRRTKLNGEDISTRSCPKLSQAYLYT 236          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_BUCBP (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=suhB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 45/153 (29.41%), Postives = 76/153 (49.67%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKNVEHKGQV---DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLL 599
            L+ A+  A++ G I+   +Y      ++ Q+   D +T+     E  + + + + +P H  I   T           E  W+++ LDG  NF +  P  CISI + + K   + V+Y+PI +ELFT V GQG+  NG  ++  S   L +SL+
Sbjct:    5 LNIAIRVARKCGNILIQ-YYDRNKTNNEKQILKKDFITKIIFVLEKTMIDMIHKSYPEHSII---TYHKNNKIFKNTEIIWLINALDGIKNFENNLPHFCISIAIIVRKTTQISVIYDPIRNELFTSVKGQGSQLNGYRMRCKSTNTLKRSLV 153          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_BUCAI (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=suhB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKNVEH---KGQV---DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTK 620
            L+ A+ A ++ G  I   + + K V+    K +V   +++ +T+K   ++I     + +P H  + +         E      WI+  LDG TNF+  FP+ C+SI + +     + V+Y+PI ++LFT V GQG+  NG   + S+   L  S +A     K
Sbjct:    5 LNIAIRAVRKGGNFIIQNYERRKFVKEDVEKNKVFLNNIIYKTNKIISEIIH----KSYPYHTILKKHENILVKKNE--KNTVWIITELDGKTNFLKYFPYFCVSIAVVVKNKTEISVIYDPIKNDLFTAVKGQGSQLNGYRTRCSAINTLNYSTVAVNPSNK 161          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: Y4FL_RHISN (Uncharacterized protein y4fL OS=Rhizobium sp. (strain NGR234) GN=NGR_a03700 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 3
Query:  150 LDTAVDAAKR------AGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTG-----VHGQGA 539
            LDT +D  +       A  + R G      +E KG+ D V+  D+  E L    +  QFP    +GEE     G  E+     W++DP+DGT NF+ G P   +SI     K P++G V  P +D L        +HG G+
Sbjct:    5 LDTRLDLLRNITSKVGAFALARFGNLSHIVIETKGEADYVSAADRDAESLARRLIHAQFPADAIVGEEQL---GDAEVDH---WLIDPIDGTANFLSGIPLWAVSIAFVRNKEPVLGAVALPALDTLLWASVDGPLHGTGS 139          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_MYCTU (Inositol-1-monophosphatase OS=Mycobacterium tuberculosis GN=suhB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 3
Query:  243 DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATEL-TDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGK----PIKVSSQTELVKSLLATEAG 614
            D VT  D   E L+ + L Q  P    +GEE       T   +D  TW++DP+DGT NFV+G P   +SIG  +G I + G V +     +++   G GA    +     ++ +   EL  +LL T  G
Sbjct:   54 DPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFG 182          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_MYCBO (Inositol-1-monophosphatase OS=Mycobacterium bovis GN=suhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 3
Query:  243 DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATEL-TDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGK----PIKVSSQTELVKSLLATEAG 614
            D VT  D   E L+ + L Q  P    +GEE       T   +D  TW++DP+DGT NFV+G P   +SIG  +G I + G V +     +++   G GA    +     ++ +   EL  +LL T  G
Sbjct:   54 DPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFG 182          
BLAST of FC930016 vs. ExPASy Swiss-Prot
Match: SUHB_BUCAP (Inositol-1-monophosphatase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=suhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 43/157 (27.39%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  150 LDTAVDAAKRAGEIIRNGFYQTKNVEH---KGQV---DLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLA 602
            L+ A+ A ++ G II   +   K ++    K ++   +++ +T +   ++I+    + +P H  + + T       +      WI++ LDG  NF+  FP  CISI + +     + V+Y+PI ++LFT V GQG+  NG  I+ ++   L  S +A
Sbjct:    5 LNIAIRAIRKGGNIIVQNYDTQKFIKEDLDKKKIFIKNIMYKTYRIISEVIY----KSYPNHIILNKNTDLI----KNEKNTLWIINELDGKNNFIKNFPHFCISIAVIMKNNTEISVIYDPIRNDLFTAVKGQGSQLNGYRIRCNNINSLNYSTIA 153          
The following BLAST results are available for this feature:
BLAST of FC930016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SUHB_BACSU1.044e-1530.19Inositol-1-monophosphatase OS=Bacillus subtilis GN... [more]
Y733_CHLP83.038e-1531.36Uncharacterized protein Cpar_0733 OS=Chlorobaculum... [more]
IMPL2_ARATH1.154e-1429.94Phosphatase IMPL2, chloroplastic OS=Arabidopsis th... [more]
SUHB_BUCBP1.276e-1329.41Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]
SUHB_BUCAI1.080e-1228.22Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]
Y4FL_RHISN3.475e-1131.91Uncharacterized protein y4fL OS=Rhizobium sp. (str... [more]
SUHB_MYCTU4.539e-1132.56Inositol-1-monophosphatase OS=Mycobacterium tuberc... [more]
SUHB_MYCBO4.539e-1132.56Inositol-1-monophosphatase OS=Mycobacterium bovis ... [more]
SUHB_BUCAP4.539e-1127.39Inositol-1-monophosphatase OS=Buchnera aphidicola ... [more]

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Properties
Property NameValue
Genbank descriptionC34002H05EF PostHarvC1 Citrus clementina cDNA clone C34002H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930016 ID=FC930016; Name=FC930016; organism=Citrus clementina; type=EST; length=673bp
GAGCTCAAAACGAAGCACAACCTGTCATTACCACCATCATCACTCATCAG
CTCGCTGTCCCTTCTCTTCTCGTTCTTCTCTTTAATTTTTTAATCCTGTA
TAATAAAAAATATACCCATATGGCACAAAATGATTCGCTTGCAAAGTTCT
TGGACACTGCAGTTGATGCAGCTAAGAGGGCTGGCGAGATAATCCGTAAT
GGGTTCTATCAAACCAAAAATGTGGAGCATAAAGGCCAGGTGGATTTGGT
CACAGAAACTGATAAAGCATGTGAGGATCTCATATTTAATCATCTCAAGC
AGCAATTTCCCACGCATAAGTTCATTGGAGAAGAAACTACCGCTGCTTGT
GGTGCCACAGAGTTGACCGATGAACCCACATGGATTGTCGATCCTCTTGA
TGGAACAACTAACTTTGTGCATGGGTTTCCCTTTGTGTGTATCTCTATCG
GTCTTACAATTGGAAAGATTCCTATTGTCGGGGTTGTCTACAATCCAATA
ATGGATGAGCTTTTTACTGGAGTCCATGGACAAGGTGCATTTTTTAATGG
AAAACCTATAAAAGTATCATCTCAAACTGAACTAGTAAAGTCTCTCCTCG
CAACAGAGGCTGGAACAAAACGTGATAAGCCAACTCTGGATGCTTCTACA
AATAGAATCATAGCTTGCTATTC
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