FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.033e-33
Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKED----LSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            E  +GEA  E +       RE +F+TSKLW    H D V P++ K+L  L++EYLDLYLIHWP +       +      P KED       +DYK  W AME+    GL ++IGLSNF+ ++ID IL+ A+I P++ QV
Sbjct:   52 EPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIHWPYAF------QRGDTPFPRKEDGTLLYDDIDYKLTWAAMEKLVGKGLVRAIGLSNFNSRQIDDILSVASIKPTVLQV 184          

HSP 2 Score: 57.3806 bits (137), Expect = 6.033e-33
Identity = 28/79 (35.44%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L+VE HP   Q +L   C+ +G+ +TAYSPLG+    W       ++E  A+  +A+ + KT AQ+ +RW  ++GV  +
Sbjct:  182 LQVESHPYLAQVELLSHCRDRGLVMTAYSPLGSPDRAWKHPDEPVLLEEPAIAALAKKYNKTPAQIIIRWQTQRGVVTI 260          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.858e-33
Identity = 51/139 (36.69%), Postives = 82/139 (58.99%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G EK +G+ +  A+  G+   R+ LF+TSK+WC N   +RV PA++ +L  LQ++Y+DLY IHWP   K  +         P   ++   D +GVW+ ME   + GL K IG+ N++  K++ +L  A IPP++ Q+ +
Sbjct:   61 GVEKEVGKGLKAAMEAGI--DRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMP------PEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEM 191          

HSP 2 Score: 58.151 bits (139), Expect = 7.858e-33
Identity = 26/75 (34.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++EMHP W+  K+ E CK  G++VTAYSPLG+         +  +  ++++A    KT  QV ++W +++G +V+
Sbjct:  188 QMEMHPGWKNDKIFEACKKHGIHVTAYSPLGS-----SEKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVI 257          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 63/138 (45.65%), Postives = 94/138 (68.12%), Query Frame = 3
Query:    6 TEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            TE  +GEA+AEA+R GL+ SR  +F+TSK+WC + H  RV+PA +++L  L M+Y+DL L+HWP+S  P + +       P +  L   D +GVW  MEE  RLGL ++IG+SNFS KK++ +L+ A + P++NQV +
Sbjct:   57 TEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYD----FPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEV 190          

HSP 2 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 1
Query:  469 MKATRISFLKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVV 723
            + A R +  +VE++P+WQQR LRE C+ +G+ +  YSPLGA GT WGS  VM++  L++IA A GKT+AQ+ LRW+ EQG  ++V
Sbjct:  178 LAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLV 262          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.500e-32
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G E  +GEAI E++       RE++F+TSKLW +  H D V  A++K+L  LQ++YLDLYL+HWP + K   +          + DL+  DYK  W+AME+    GL K+IGLSNF+ +++D IL+ AT+ P++ QV
Sbjct:   53 GNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVFPQNPDGSVQYDLT--DYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQV 187          

HSP 2 Score: 48.1358 bits (113), Expect = 6.500e-32
Identity = 25/79 (31.65%), Postives = 43/79 (54.43%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L+VE HP   Q +L   C+  G+ +T YSPLG+    W   +   ++E   +  +A+ +  + AQ+ LRW V++ V  +
Sbjct:  185 LQVECHPYLAQNELIACCRSHGLVLTGYSPLGSPDRSWRKPEDPVLLEEPGIIAMAKKYNISEAQILLRWQVQRRVVTI 263          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 8.466e-32
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKED----LSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            E+ +GEA+ E L  G    R+ +F+TSKLW    H D V  A ++SLS L++ YLDLYLIHWP++     E       +P   D         Y+  W AME+    GL K+IGLSNF+ K+ID IL+ A   P +NQV
Sbjct:   52 EREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDE------LIPRHPDGTIQYDDTHYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDILSIAKHKPVVNQV 184          

HSP 2 Score: 55.4546 bits (132), Expect = 8.466e-32
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP   Q +L   C  + + VTAYSPLG+    W   G   ++++  +  IA+++ KT AQV +RW +++GV  +
Sbjct:  183 QVECHPYLVQAELVSHCWSRNLTVTAYSPLGSPDRPWVTPGEALLLDDPRVVGIAKSYNKTPAQVIIRWHIQRGVVCI 260          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.471e-32
Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPI---SAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            EK +G A+ E    G +  RE +F  SKLW    H   V    +K+L  L +EYLDLYLIHWPI   +A P+    +       +  L+ +  +  W+ ME+    GL KSIG+SNF+ + +  +LT+A I P+INQV +
Sbjct:   57 EKEIGHALKEVFAEGEI-KREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGEPVLAAVSIRETWQEMEKLVEYGLVKSIGVSNFNVQNLVDLLTYAKIKPAINQVEV 195          

HSP 2 Score: 63.929 bits (154), Expect = 8.471e-32
Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP   Q  L+ FC   G+ +TAYSPLG      G   ++ NE LK IA+ H KTVA V  +W+ ++G+  +
Sbjct:  192 QVEVHPYLSQPNLKYFCDRYGIVLTAYSPLGQ-----GKCDLLSNETLKSIADKHNKTVANVIFKWLNQRGIVTI 261          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 7.004e-31
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSE---EEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E  +G AI E LR  +V  RE+LFI SKLWC       V  A +K+LS L+++YLDLYLIHWP   KP  E    +E G  +P+  D + LD    W AMEE    GL K+IG+SNF+  +++ IL    +   P++NQ+
Sbjct:   52 ENEVGVAIQEKLREQVV-KREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPS--DTNILD---TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQI 185          

HSP 2 Score: 62.3882 bits (150), Expect = 7.004e-31
Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E HP   Q KL ++C+ KG+ VTAYSPLG+    W   +   ++E+  +K IA  H KT AQV +R+ +++ + V+
Sbjct:  184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVI 261          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.187e-30
Identity = 55/142 (38.73%), Postives = 85/142 (59.86%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAK--PTSEEEEVGMSLPNKEDLSPLDYKGV-----WEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            EK +G  + +A+  G+V  RE LF+TSKLW +  H D V  A+ ++LS LQ++Y+DL+LIH+P++ K  P  E+   G      ++    DY+ V     W+A+E+  + G  +SIG+SNF    +  +L  ATI PS+ QV
Sbjct:   51 EKLVGAGVKKAIDEGIV-KREDLFLTSKLWNNYHHPDNVEKALNRTLSDLQVDYVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDN---FDYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLLRGATIKPSVLQV 188          

HSP 2 Score: 65.4698 bits (158), Expect = 1.187e-30
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 1
Query:  487 SFLKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAV-------GTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            S L+VE HP  QQ +L EF + +G+ VTAYS  G         G    ++ + ENE +K IA  HGK+ AQV LRW  ++G+ ++
Sbjct:  184 SVLQVEHHPYLQQPRLIEFAQSRGIAVTAYSSFGPQSFVELNQGRALNTSPLFENETIKAIAAKHGKSPAQVLLRWSSQRGIAII 268          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.548e-30
Identity = 56/137 (40.88%), Postives = 83/137 (60.58%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            EK +GEA  +         RE +FITSKLW      + V PA++++LS L ++YLDLYL+HWP++ + TS + +   S   +E +S    +  WE ME+    GL KSIGLSNF+ + +  +L++A I P+ NQV L
Sbjct:   52 EKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGS--TQEFVS---IRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLSYARIKPAANQVEL 183          

HSP 2 Score: 53.1434 bits (126), Expect = 1.548e-30
Identity = 24/75 (32.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP   Q +L++FC    +++TAYSPL       G+   ++NE +  IA+ + KT+  V  +W +++  +V+
Sbjct:  180 QVELHPFLSQPELKKFCDKHNIHLTAYSPL-------GNGAFVDNEEVGAIAKKYNKTIPNVLCKWAIQKNFSVI 247          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.622e-30
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEE---EEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            EK +G A+ E L+  +V  R+ LFI SKLWC       V  A +K+LS LQ++YLDLYLIHWP   KP  +    +  G  +P     S  D+   W AME+    GL K+IG+SNF+  +I+ IL    +   P++NQ+
Sbjct:   52 EKEVGVALQEKLKEQVV-KRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIP-----SDTDFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQI 185          

HSP 2 Score: 62.7734 bits (151), Expect = 2.622e-30
Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E HP   Q KL E+C  KG+ VTAYSPLG+    W   +   ++E+  +K+IA  + KT AQV +R+ +++ + V+
Sbjct:  184 QIECHPYLTQEKLIEYCHCKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKEIAAKYNKTTAQVLIRFPIQRNLVVI 261          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
A1A1B_DANRE6.033e-3342.45Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
ALDR_HORVU7.858e-3336.69Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
NADO1_ORYSJ4.074e-3245.65Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
AK1A1_XENLA6.500e-3243.07Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
A1A1A_DANRE8.466e-3242.45Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
ALRB_DICDI8.471e-3238.57Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
ALDR_HUMAN7.004e-3143.57Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
XYL1_PICST1.187e-3038.73NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
ALRA_DICDI1.548e-3040.88Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
ALDR_RAT2.622e-3040.71Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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