FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.251e-19
Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            E   G AIA +        RE +F+ +KLW  +  +D  + A   S+  L ++YLDLYLIHWP+                NK       +   ++A    +  G  +SIG+SNF  + + T++    I P++NQ+ L
Sbjct:   52 ETETGRAIANS-----GVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPEN-------------NK-------FVDTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIEL 163          

HSP 2 Score: 50.447 bits (119), Expect = 7.251e-19
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q++LR+     G+   A+SPLG          ++ +  +  IAE HGKT AQV +RW ++ G  V+
Sbjct:  160 QIELHPLLPQQELRDVHAKLGIATEAWSPLG-------QGSLLADPVITGIAEQHGKTPAQVLIRWHIQLGNIVI 227          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.504e-18
Identity = 38/139 (27.34%), Postives = 67/139 (48.20%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G A+  +   G+   RE++++T+KL   +        A + SL  L ++Y+DLYLIHWP                          Y   W  + ++++ G+ +SIG+ NF+ + +  I+  +   P+INQ+ L
Sbjct:   59 GNEAAVGRAVNAS---GI--PREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGK--------------------YIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIEL 172          

HSP 2 Score: 52.7582 bits (125), Expect = 3.504e-18
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q +LRE     G+   AY PLG         +++++ A+  +A+AH KT AQV LRW ++ G  V+
Sbjct:  169 QIELHPLLNQAELREVNAGYGIVTEAYGPLGV-------GRLLDHAAVTGVAQAHDKTPAQVLLRWSIQLGNVVI 236          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.862e-17
Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+  AIA +   G+   R QLF+T+KL   +    +   A   SL  L M+Y+DLYLIHWP  A P  +                  Y   W  M +S+  G  +SIG+ NF+ + +  I+    + P++NQ+ L
Sbjct:   58 GNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWP--APPVGQ------------------YVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIEL 171          

HSP 2 Score: 43.8986 bits (102), Expect = 2.862e-17
Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q ++R+      +   +Y+PL          ++M+N  L  IA  +GKT AQV LRW ++ G  VV
Sbjct:  168 QIELHPLLNQDEMRKSNAQHNVITQSYTPLVL-------GRLMDNSTLTAIAAEYGKTPAQVLLRWNLQLGNAVV 235          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.862e-17
Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+  AIA +   G+   R QLF+T+KL   +    +   A   SL  L M+Y+DLYLIHWP  A P  +                  Y   W  M +S+  G  +SIG+ NF+ + +  I+    + P++NQ+ L
Sbjct:   58 GNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWP--APPVGQ------------------YVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIEL 171          

HSP 2 Score: 43.8986 bits (102), Expect = 2.862e-17
Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q ++R+      +   +Y+PL          ++M+N  L  IA  +GKT AQV LRW ++ G  VV
Sbjct:  168 QIELHPLLNQDEMRKSNAQHNVITQSYTPLVL-------GRLMDNSTLTAIAAEYGKTPAQVLLRWNLQLGNAVV 235          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 66/208 (31.73%), Postives = 95/208 (45.67%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKP-------TSEEEEVGMSLPNKEDL----------SPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQVSLPQTMFVRTHMT*YDWLNESNTYFFFEGGDAPCLATKEA*RILQGQGHECHGV 575
            E+ +G  I   ++ G V  RE LFI +KLWC       V  A +KSL AL++ YLDLYLIHWP+  KP       +  E    +S P  +DL          S  D+   WEAME+    GL K+IG+SNF+ ++++ +L    +   P  NQ+              + +L + N   F +  D    A +         G  C GV
Sbjct:   43 EREVGAGIRCKIKEGAVR-REDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWPMGFKPPHPEWIMSCSELSFCLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPLTNQIEC------------HPYLTQKNLISFCQSRDVSVTAYRPL-------GGSCEGV 230          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.171e-17
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +   G+   RE+LF+T+KL            + K+SL  L ++YLDLYLIHWP    PT  +                 Y   +E M E++  G  +SIG+SNF+   + T++      P++NQV L
Sbjct:   62 GNEAAVGRAIAAS---GI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP---APTLGK-----------------YVESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETNEVPAVNQVEL 175          

HSP 2 Score: 41.2022 bits (95), Expect = 8.171e-17
Identity = 24/75 (32.00%), Postives = 39/75 (52.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP   Q +LR+      +   +YSPLG         +++E   +  IA  +G+T AQV +RW ++    VV
Sbjct:  172 QVELHPRLNQAELRQVHAQHDVTTQSYSPLGV-------GRLIEEPTVTTIAAEYGRTPAQVLVRWNLQLDNVVV 239          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.333e-16
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +   G+   RE+LF+T+KL            + K+SL  L ++YLDLYLIHWP          ++G             Y   +E M E++  G  +SIG+SNF+   + T++      P++NQV L
Sbjct:   62 GNEAAVGRAIAAS---GI--PREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP--------APKLG------------KYVESFEGMIEARERGHVRSIGVSNFTEDLLATVIEETDEVPAVNQVEL 175          

HSP 2 Score: 41.2022 bits (95), Expect = 2.333e-16
Identity = 24/75 (32.00%), Postives = 39/75 (52.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP   Q +LR+      +   +YSPLG         +++E   +  IA  +G+T AQV +RW ++    VV
Sbjct:  172 QVELHPRLNQAELRQVHAQHDVTTQSYSPLGV-------GRLIEEPTVTTIAAEYGRTPAQVLVRWNLQLDNVVV 239          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y3816_MYCA1 (Uncharacterized oxidoreductase MAV_3816 OS=Mycobacterium avium (strain 104) GN=MAV_3816 PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 3.033e-16
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +   G+   R +LF+T+KL   +      + A + SL  L ++Y+DLYLIHWP  A  T                    Y   +  M +S+  G  +SIG+SNF+ + + T++    + P++NQ+ L
Sbjct:   60 GNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPALGT--------------------YVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIEL 173          

HSP 2 Score: 39.6614 bits (91), Expect = 3.033e-16
Identity = 22/75 (29.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q  LR+      +   +Y+PL A+G      ++ ++  +  +A  +GKT +QV LRW ++ G  V+
Sbjct:  170 QIELHPLLNQEALRKTNAEHNVVTQSYTPL-ALG------KLNDHPTVNSVAAEYGKTASQVLLRWNLQLGNAVI 237          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.126e-16
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G A+A +   G+   R +LF+T+K+   +        A K SL  L ++Y+DLYLIHWP  A        VG             Y   +  + +++  G T+SIG+SNF+ + +  ++    + P++NQV L
Sbjct:   58 GNEAAVGRALAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPA--------VG------------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVEL 171          

HSP 2 Score: 42.3578 bits (98), Expect = 5.126e-16
Identity = 26/75 (34.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP+  Q +LR+      +   +Y+PL A+G      Q+ +N  +  IA  +GKT  QV LRW ++ G  V+
Sbjct:  168 QVELHPLLNQDELRKANAQHNVVTQSYTPL-ALG------QLADNPTVTSIAGEYGKTPTQVLLRWNLQLGNAVI 235          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.126e-16
Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +   G+   R +LF+T+K+   +        A K SL  L ++Y+DLYLIHWP  A                       Y   +  + +++  G T+SIG+SNF+ + +  ++    + P++NQV L
Sbjct:   57 GNEAAVGRAIAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAAG--------------------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVEL 170          

HSP 2 Score: 42.3578 bits (98), Expect = 5.126e-16
Identity = 26/75 (34.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP+  Q +LR+      +   +Y+PL A+G      Q+ +N  +  IA  +GKT  QV LRW ++ G  V+
Sbjct:  167 QVELHPLLNQDELRKANAQHNVVTQSYTPL-ALG------QLADNPTVTSIAGEYGKTPTQVLLRWNLQLGNAVI 234          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
Y2408_MYCS27.251e-1929.93Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
Y1918_MYCSJ3.504e-1827.34Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y1669_MYCLE2.862e-1732.37Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB2.862e-1732.37Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
AKCL2_HUMAN6.314e-1731.731,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
Y4149_MYCPA8.171e-1734.53Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]
Y4483_MYCA12.333e-1633.81Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
Y3816_MYCA13.033e-1631.65Uncharacterized oxidoreductase MAV_3816 OS=Mycobac... [more]
Y1987_MYCUA5.126e-1630.94Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
Y1744_MYCMM5.126e-1630.22Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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