FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 6.652e-16
Identity = 31/118 (26.27%), Postives = 61/118 (51.69%), Query Frame = 3
Query:   66 REQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            R ++F+T+KL+  +  ++R + A  +SL  L ++Y+DLYL+HWP      + +                     W+A E+    G  ++IG+ NF   ++D ++  + + P++NQ+ L
Sbjct:   69 RAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTKDWNATIQS--------------------WKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIEL 166          

HSP 2 Score: 45.8246 bits (107), Expect = 6.652e-16
Identity = 24/81 (29.63%), Postives = 40/81 (49.38%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAV------GTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP + Q+ L    +  G+   A+SP+G            G    + +  +  IAEAHG++ AQV LRW  +  V  +
Sbjct:  163 QIELHPYFAQKPLLAKNRALGIVTEAWSPIGGAINDGDGDNHGGRKHPLTDPVITTIAEAHGRSAAQVILRWHFQNDVVAI 243          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAK---PTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVS----LPQTMFV 437
            G E   G+ IA A++ GLV  RE+LFI SKLW      DRV P  +K L+   ++Y DLY++H+PIS K   P         S  ++ +      +  W AME      L +SIG+SNFS + +  +L +A I P+  Q+     L QT  V
Sbjct:   51 GNEVEAGQGIARAIKDGLV-KREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNATIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLV 201          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 56/141 (39.72%), Postives = 78/141 (55.32%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAK--PTSEEEEVGMSLPNKEDLSPLDYKGV--WEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G EK +GE I  A++ GLV  R+ LFITSKLW +    + V  A+ KSLS   ++Y DLYL+H+PIS K  P  E+   G    + +     D   +  W AME     GL KSIG+SN S   ++ ++  A I P+  Q+
Sbjct:   49 GNEKEVGEGINRAIKDGLV-KRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYFDLYLMHFPISFKFVPFEEKYPPGFYCGDGDKFIYEDVPIIETWRAMENLVDEGLVKSIGVSNVSGGLLEDLIKAARIKPASLQI 188          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y3007_MYCPA (Uncharacterized oxidoreductase MAP_3007 OS=Mycobacterium paratuberculosis GN=MAP_3007 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.463e-15
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +   G+   R +LF+T+KL   +      + A + SL  L ++Y+DLYLIHWP  A  T                    Y   +  M +S+  G  +SIG+SNF+ + + T++    + P++NQ+ L
Sbjct:   57 GNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPAPALGT--------------------YVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIEL 170          

HSP 2 Score: 37.3502 bits (85), Expect = 1.463e-15
Identity = 21/75 (28.00%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q  LR+      +   +Y+PL A+G      ++ ++  +  +A  +GKT +QV LRW ++    V+
Sbjct:  167 QIELHPLLNQEALRKTNAEHNVVTQSYTPL-ALG------KLNDHPTVNSVAAEYGKTASQVLLRWNLQLSNAVI 234          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 50/140 (35.71%), Postives = 82/140 (58.57%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSE---EEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E  +GEAI E +  G V  RE++F   KLW  +   + V PA++++L  L+++Y+DLY+I  P++ KP  E   ++E G  + +K +L        WEA+E  +  GL KS+G+SNF+ ++++ IL    +   P  NQV
Sbjct:   60 EHEVGEAIREKVAEGKV-KREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPGEEFYPKDENGRVIYHKSNLC-----ATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQV 193          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.171e-15
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G E+ +G A+ EA        R +LFITSK+  HN   D +  A+ +SL  L  +YLDLYL+H PI   P  E++     +P  E          W+AME +   GL  S+G+SNF    ++ +L  +TI P +NQ+
Sbjct:   55 GNEEEVGVALKEAN-----VPRSKLFITSKVM-HNV--DNIPEALNESLRKLGTDYLDLYLLHSPI---PFYEKK-----IPISEG---------WKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQI 166          

HSP 2 Score: 32.7278 bits (73), Expect = 4.171e-15
Identity = 24/74 (32.43%), Postives = 37/74 (50.00%), Query Frame = 1
Query:  496 KVEMHP-VWQQRK-LREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGV 711
            ++E HP V++  K L EFC+ KG+ V  Y PL  +  R     V   E  K +   +  +  Q+ L+W   +GV
Sbjct:  165 QIEFHPQVYKAAKPLVEFCQSKGIIVEGYGPLSPL-VRDAQGPVA--EFTKSLESKYHVSDTQILLKWAYSKGV 235          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 56.9954 bits (136), Expect = 4.175e-15
Identity = 37/130 (28.46%), Postives = 61/130 (46.92%), Query Frame = 3
Query:   30 IAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            +  A+R   V  R++L + SK+          + +I+ SL  L ++ +DL LIHWP           VG  L              W  M +++  GL +SIG+SNF+   + T++    + P++NQV L
Sbjct:   57 VGRAVRASSV-DRDELIVASKIPGRQHGRAEAVDSIRGSLDRLGLDVIDLQLIHWP--------NPSVGRWLDT------------WRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAVNQVEL 165          

HSP 2 Score: 45.0542 bits (105), Expect = 4.175e-15
Identity = 24/75 (32.00%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP + Q  LR F    G+   ++SPL         ++++  + L+++A  +G T  QV LRW V+ G T +
Sbjct:  162 QVELHPYFPQAALRAFHDEHGIRTESWSPLAR------RSELLTEQLLQELAVVYGVTPTQVVLRWHVQLGSTPI 230          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 3.391e-14
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVT-SREQLFITSKLWCHNAHHDRVIPAIKKSLSALQ-MEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQVSL 419
            G EK +G+ I + L        RE++F T+KLW     + R   AI++ L+ +  ++Y+DL LIH P+       E                     W AM+E+   GL KSIG+SN+  K ID +L +  +   P +NQ+ +
Sbjct:   51 GNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSPLEGSKLRLE--------------------TWRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQIEI 173          

HSP 2 Score: 35.8094 bits (81), Expect = 3.391e-14
Identity = 19/71 (26.76%), Postives = 37/71 (52.11%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQG 708
            ++E+ P   +++L ++CK KG+ V A++PL            M N  L ++ +   +   QV +RW ++ G
Sbjct:  170 QIEISPWIMRQELADYCKSKGLVVEAFAPL-------CHGYKMTNPDLLKVCKEVDRNPGQVLIRWSLQHG 233          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: KAR_YEAST (NADPH-dependent alpha-keto amide reductase OS=Saccharomyces cerevisiae GN=YDL124W PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.625e-13
Identity = 33/116 (28.45%), Postives = 55/116 (47.41%), Query Frame = 3
Query:   66 REQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            R  +F+T K        D     +  +L  +  +Y+DLYL+H P  +K  +     G+SL              W+ ME+  + G  K+IG+SNF+ + +  IL  A + P +NQ+
Sbjct:   81 RNAIFLTDKYSPQIKMSDSPADGLDLALKKMGTDYVDLYLLHSPFVSKEVN-----GLSLEE-----------AWKDMEQLYKSGKAKNIGVSNFAVEDLQRILKVAEVKPQVNQI 180          

HSP 2 Score: 41.5874 bits (96), Expect = 1.625e-13
Identity = 24/78 (30.77%), Postives = 44/78 (56.41%), Query Frame = 1
Query:  496 KVEMHPVWQQRK--LREFCKVKGMNVTAYSPLGAVGTRWGSNQVMEN-EALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E  P  Q +   + +FC+   + V AYSPLG +  +   +      E +K+++E + K+ AQ+ LRW+ ++GV  V
Sbjct:  179 QIEFSPFLQNQTPGIYKFCQEHDILVEAYSPLGPLQKKTAQDDSQPFFEYVKELSEKYIKSEAQIILRWVTKRGVLPV 256          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLW--CHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEE------VGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVS----LPQTMFVR 440
            G E  +G  I +A+  GLV  RE LFI +KLW   H+  H R +    + L    +EY DLYLIH+P+  +             VG +   + + SP+     W  +E+    GL ++IG++NF+C+ I  +LT+A I P++ Q+     LPQ   V+
Sbjct:   52 GNEVEVGRGINKAINEGLV-KREDLFIVTKLWNTFHSKKHVRAL--FDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHE--CWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERLVK 204          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
MORA_PSEPU6.652e-1626.27Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
XYL1_ASPNG9.118e-1636.84NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
XYL1_PACTA1.191e-1539.72NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
Y3007_MYCPA1.463e-1531.65Uncharacterized oxidoreductase MAP_3007 OS=Mycobac... [more]
AK1D1_RAT2.031e-1535.713-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
I3ACR_SCHPO4.171e-1536.50NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
DKGB_CORSS4.175e-1528.462,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]
YJ66_YEAST3.391e-1430.77Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]
KAR_YEAST1.625e-1328.45NADPH-dependent alpha-keto amide reductase OS=Sacc... [more]
DTDH_MUCMU3.243e-1333.544-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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