FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.698e-25
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDR--VIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSL----PNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            E+ +GE I  A++ G+V  RE+LFITSKLW  N+ HD+  V  A+ K+LS L ++Y+DL+ IH+PI+ KP   E++          +K  +  +     W A+E+    GL KSIG+SNFS + I  ++   TI P   Q+
Sbjct:   57 EQEVGEGIKRAIKEGIV-KREELFITSKLW--NSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQI 194          

HSP 2 Score: 48.1358 bits (113), Expect = 1.698e-25
Identity = 26/83 (31.33%), Postives = 45/83 (54.22%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGA-------VGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L++E HP   Q KL E+ ++  + +T YS  G        +     +  ++E   +K IA+ HGK+ AQV LR+  ++G+ V+
Sbjct:  192 LQIEHHPYLTQPKLVEYVQLHDIQITGYSSFGPQSFLEMDLKRALDTPVLLEEPTVKSIADKHGKSPAQVLLRYQTQRGIAVI 274          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.698e-25
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKG-----------VWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E+ +G AI   +  G V  RE +F TSKLW      + V PA++ SL   Q++Y+DLYLIH P+S KP              E+LSP D  G            WEAMEE +  GL KSIG+SNF+ ++++ IL    +   P  NQV
Sbjct:   58 EEQVGLAIRSKIADGSV-KREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP-------------GEELSPTDENGKVIFDIVDLCTTWEAMEECKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQV 191          

HSP 2 Score: 51.9878 bits (123), Expect = 1.698e-25
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAV-GTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP + + KL +FCK K + + AYS LG+    RW    S  ++E+  L  +A+ H +T A ++LR+ +++GV V+
Sbjct:  190 QVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVL 268          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.209e-25
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSE---EEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTIL 377
            E  +GEAI E +  G V  RE +F   KLW  N   + V P ++++L  LQ++Y+DLY+I  P++ KP  E    +E G  L +K +L        WEAME  +  GL KS+G+SNF+ ++++ IL
Sbjct:   61 EHEVGEAIREKIAEGKVR-REDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLC-----ATWEAMEACKDAGLVKSLGVSNFNRRQLELIL 180          

HSP 2 Score: 54.299 bits (129), Expect = 2.209e-25
Identity = 27/79 (34.18%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGA----VGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP + Q KL +FC+   + +TAYSPLG     +     S  ++++  L  + + + KT AQ+ LR+ +++GV V+
Sbjct:  193 QVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVI 271          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.876e-25
Identity = 56/145 (38.62%), Postives = 79/145 (54.48%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEE------VGMSLPNKEDLSP--LDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G EK +GE I +A+  GLV SR+ +F+ SKLW +  H D V  A+KK+LS + ++YLDLY IH+PI+ K    EE+       G     K  ++   +     + A+EE    GL KSIG+SNF    I  +L    I P   Q+
Sbjct:   50 GNEKEVGEGIRKAISEGLV-SRKDIFVVSKLWNNFHHPDHVKLALKKTLSDMGLDYLDLYYIHFPIAFKYVPFEEKYPPGFYTGADDEKKGHITEAHVPIIDTYRALEECVDEGLIKSIGVSNFQGSLIQDLLRGCRIKPVALQI 193          

HSP 2 Score: 53.1434 bits (126), Expect = 2.876e-25
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGA-------VGTRWGSNQVMENEALKQIAEAH-GKTVAQVSLRWIVEQGVTVV 720
            L++E HP   Q  L EFCK+  + V AYS  G        +     +  + EN+ +K++++ H G T +QV LRW  ++G+ V+
Sbjct:  191 LQIEHHPYLTQEHLVEFCKLHDIQVVAYSSFGPQSFIEMDLQLAKTTPTLFENDVIKKVSQNHPGSTTSQVLLRWATQRGIAVI 274          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.877e-25
Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHD--RVIPAIKKSLSALQMEYLDLYLIHWPISAK--PTSEEEEVGMSLPNKEDLSPLDYKGV-----WEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G EK +GE I  AL  GLV +R++LF+ SKLW  N+ HD   V  A+ ++LS L+++YLDL+LIH+PI+ K  P  E+   G       D     Y+GV     W A+E+    G  +SIG+SNF    I  +L  A I P++ Q+
Sbjct:   48 GNEKEVGEGINRALDEGLV-ARDELFVVSKLW--NSFHDPKNVEKALDRTLSDLKVDYLDLFLIHFPIAFKFVPFEEKYPPGFYC---GDGDKFIYEGVPIIDTWRALEKMVEKGKIRSIGISNFPGALIQDLLRGAKIKPAVLQI 187          

HSP 2 Score: 51.6026 bits (122), Expect = 2.877e-25
Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ-------VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L++E HP  QQ +L E+ + +G+ +TAYS  G       ++        + E++ +K +AE   KT AQV LRW  ++G+ V+
Sbjct:  185 LQIEHHPYLQQPRLIEYVQSQGIAITAYSSFGPQSFVELNHPRVKDVKPLFEHDVIKSVAEKANKTPAQVLLRWATQRGLAVI 267          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 4.872e-25
Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKG-----------VWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E+ +G AI   +  G V  RE +F TSKLW      + V PA++ SL   Q++Y+DLYLIH P+S KP              E+LSP D  G            WEAME+ +  GL KSIG+SNF+ ++++ IL    +   P  NQV
Sbjct:   58 EEQVGLAIRSKIADGSV-KREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP-------------GEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQV 191          

HSP 2 Score: 51.9878 bits (123), Expect = 4.872e-25
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAV-GTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP + + KL +FCK K + + AYS LG+    RW    S  ++E+  L  +A+ H +T A ++LR+ +++GV V+
Sbjct:  190 QVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVL 268          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.346e-25
Identity = 49/145 (33.79%), Postives = 81/145 (55.86%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKE------DLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFA--TIPPSINQVSL 419
            E  +G+AI ++        RE++F+T+KLWC   H   V  A+ +SL  L ++Y+DLYL+HWP    P   + E  +S+P K+      D++  ++   WE M+E  + G TK++G+SNFS   +  +L      + P+ NQV +
Sbjct:   59 EDQVGQAIKDS-----GVPREEIFVTTKLWCTQHHEPEV--ALDQSLKRLGLDYVDLYLMHWPARLDPAYIKNEDILSVPTKKDGSRAVDITNWNFIKTWELMQELPKTGKTKAVGVSNFSINNLKDLLASQGNKLTPAANQVEI 196          

HSP 2 Score: 47.3654 bits (111), Expect = 6.346e-25
Identity = 25/75 (33.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP+  Q +L  FCK KG+ V AYSPLG+         +++   + +IA+ +      V + W V++G  V+
Sbjct:  193 QVEIHPLLPQDELINFCKSKGIVVEAYSPLGSTDA-----PLLKEPVILEIAKKNNVQPGHVVISWHVQRGYVVL 262          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.367e-24
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGV-----WEAMEESQRLGLTKSIGLSNFSCKKIDTIL 377
            EK +G AI   +  G V  RE +F TSK+WC     + V   +++SL  LQ++Y+DLYLIH+P++ KP       G +   K++   L Y  V     WEAME+ +  GL KSIG+SNF+ ++++ IL
Sbjct:   58 EKEVGLAIRSKIADGTV-KREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKP-------GENYLPKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKIL 177          

HSP 2 Score: 48.521 bits (114), Expect = 2.367e-24
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTR-W---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP   Q KL +FC+ K + + AYS LG+   + W    S  +++N  L  +A+ + +T A ++LR+ +++GV V+
Sbjct:  190 QVECHPYLNQGKLLDFCRSKDIVLVAYSALGSHREKQWVDQSSPVLLDNPVLGSMAKKYNRTPALIALRYQLQRGVVVL 268          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.367e-24
Identity = 51/140 (36.43%), Postives = 81/140 (57.86%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSE---EEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E  +GEAI E +  G V  RE++F   KLW        V+PA++++L AL+++Y+DLY+I  P++ KP  E    +E G  + +K +L        WEA+E  +  GL KS+G+SNF+ ++++ IL    +   P  NQV
Sbjct:   60 EHEVGEAIREKIAEGKV-KREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPGKEIYPRDENGRIIYDKTNLC-----ATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPVTNQV 193          

HSP 2 Score: 50.8322 bits (120), Expect = 2.367e-24
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAV-GTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP + Q KL +FC+   + + A+SPLG      W    S  ++ +E L  + + + KT AQ+ LR+ +++G+ V+
Sbjct:  192 QVECHPYFTQTKLLKFCQQHDIVIVAHSPLGTCRNPSWVNVSSPPLLNDELLTSLGKKYNKTQAQIVLRFNIQRGIVVI 270          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.217e-24
Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGV-----WEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            G E  +G  I   +  G V  RE +F T KLWC     D V   +++SL  + M+YLDL+L+HWP+S KP+      G S P+ +D  P  Y  V     WEA+E  +  GL +S+G+SNF+ ++++ IL    +   P  NQV
Sbjct:   57 GNEMHIGNGIRSKISDGTV-KREDIFYTGKLWCTYFSPDMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPS------GASDPSDKD-KPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQV 192          

HSP 2 Score: 45.0542 bits (105), Expect = 5.217e-24
Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTR-W---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE H    Q KL  +CK K + +  YS LG+   R W       ++++  L +IA  + +T A+V++R+I+++G+ V+
Sbjct:  191 QVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSHRDRNWVDLSLPVLLDDPILNKIAAKYNRTSAEVAMRFILQKGIVVL 269          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
XYL1_CANPA1.698e-2539.01NADH-dependent D-xylose reductase OS=Candida parap... [more]
AK1C3_PONAB1.698e-2539.19Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1D1_HUMAN2.209e-2538.893-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
GRE3_YEAST2.876e-2538.62NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
XYL1_PICGU2.877e-2540.41NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
AK1C3_HUMAN4.872e-2538.51Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
GCY_YEAST6.346e-2533.79Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
DHB5_MOUSE2.367e-2439.84Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
AK1D1_MOUSE2.367e-2436.433-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
CRO_RANCA5.217e-2437.50Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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