FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.217e-24
Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAK--PTSEEEEVGMSLPNKEDL---SPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            G EK  GE +A A++ GLV  RE LFI SKLW      D+V P  ++ L+  Q++Y DL+L+H+P + +    S     G     K ++        +  W AME     GL +SIG+SN+  + +   L +A I P+  Q+
Sbjct:   51 GNEKECGEGVARAIKDGLV-KREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQI 191          

HSP 2 Score: 52.373 bits (124), Expect = 5.217e-24
Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVG-------TRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L++E HP  QQ  L    + +G+ VTAYS  G  G              +M++  +K +A+ H +T AQV LRW  ++G+ V+
Sbjct:  189 LQIEHHPYLQQPDLVSLAQTEGIVVTAYSSFGPTGFMELDMPRAKSVAPLMDSPVIKALADKHRRTPAQVLLRWATQRGIAVI 271          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.236e-24
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSLPQTM 431
            E + +AL+   V +RE+LFIT+KLW  N    R   A+++SL  LQ++YLDLYL+HWP+ A                       Y   W+ M   Q+ GL KSIG+ NF    +  ++    +PP INQ+ L   M
Sbjct:   55 EGVGKALKAASV-AREELFITTKLW--NDDQKRPREALQESLKKLQLDYLDLYLMHWPVPAID--------------------HYVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLM 167          

HSP 2 Score: 50.447 bits (119), Expect = 5.236e-24
Identity = 22/75 (29.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+ QQR+L  +     +   ++SPL       G   V + + ++++A+ +GKT AQ+ +RW ++ G+ V+
Sbjct:  160 QIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-----GGEGVFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVI 229          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.835e-24
Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSE---EEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIP--PSINQV 413
            E+ +G+AI   +  G V  RE +F TSKLW  +   + V P+++ SL  L ++Y+DLYLIH+P+S KP  E   ++E G  +     L  +D    WEAME+ +  GL KSIG+SNF+ ++++ IL    +   P  NQV
Sbjct:   58 EEEIGQAIVSKIEDGTV-KREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGDELLPQDEHGNLI-----LDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKHRPVCNQV 191          

HSP 2 Score: 40.0466 bits (92), Expect = 8.835e-24
Identity = 22/80 (27.50%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ----VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVV 723
            +VE H    Q KL  +CK+  + + AY  LG    ++  N+    ++++  L  +A+ + +T A ++LR+ +E+G+  +V
Sbjct:  190 QVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINEDTPVLLDDPILCTMAKKYKRTPALIALRYQLERGIVTLV 269          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.866e-24
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSLPQTM 431
            E + +AL+   V +RE+LFIT+KLW  N  H+R   A+  SL  LQ++Y+DLYL+HWP+ A                       Y   W+ M E Q+ GL KSIG+ NF    +  ++    + P INQ+ L   M
Sbjct:   55 EGVGKALKNASV-NREELFITTKLW--NDDHNRPREALLDSLKKLQLDYIDLYLMHWPVPAID--------------------HYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLM 167          

HSP 2 Score: 50.8322 bits (120), Expect = 8.866e-24
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+ QQR+L  +     +   ++SPL       G   V + + ++ +A+ +GKT AQ+ +RW ++ G+ V+
Sbjct:  160 QIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-----GGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVI 229          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.496e-23
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKP------------TSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQV 413
            EK +G+ +  A++ GLV  RE L + SKLW    H D V  A++++LS LQ++Y+D++ IH+P++ KP            T +E+E    +  +E +  LD    W A+E+    G  KS+G+SNFS   I  +L  A I P   Q+
Sbjct:   55 EKEVGQGVNRAIKEGLV-KREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHI-EEEQVPLLD---TWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQI 196          

HSP 2 Score: 50.0618 bits (118), Expect = 1.496e-23
Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 1
Query:  493 LKVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ-------VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            L++E HP   Q +L ++ K  G+ V AYS  G V      N+       + E++ +K IA  H  T  QV LRW  + G+ ++
Sbjct:  194 LQIEHHPYLTQERLIKYVKNAGIQVVAYSSFGPVSFLELENKKALNTPTLFEHDTIKSIASKHKVTPQQVLLRWATQNGIAII 276          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.501e-23
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSLPQTM 431
            E + +AL+   V +RE+LFIT+KLW  N  H R   A+  SL  LQ++Y+DLYL+HWP+ A                       Y   W+ M E Q+ GL KSIG+ NF    +  ++    + P INQ+ L   M
Sbjct:   55 EGVGKALKNASV-NREELFITTKLW--NDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAID--------------------HYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLM 167          

HSP 2 Score: 50.8322 bits (120), Expect = 1.501e-23
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+ QQR+L  +     +   ++SPL       G   V + + ++ +A+ +GKT AQ+ +RW ++ G+ V+
Sbjct:  160 QIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-----GGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVI 229          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-23
Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGV-----WEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            G E  +G  I   +  G V  RE +F T KLWC     + V   +++SL  + M+YLDL+L+HWP+S KP+      G S P+ +D  P  Y  V     WEA+E  +  GL +S+G+SNF+ ++++ IL    +   P  NQV
Sbjct:   57 GNEMHIGNGIRSKISDGTV-KREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPS------GASDPSDKD-KPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQV 192          

HSP 2 Score: 44.2838 bits (103), Expect = 2.533e-23
Identity = 23/79 (29.11%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTR-W---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE H    Q KL  +CK K + +  YS LG+   R W       ++++  L ++A  + +T A++++R+I+++G+ V+
Sbjct:  191 QVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSHRDRNWVDLSLPVLLDDPILNKVAAKYNRTSAEIAMRFILQKGIVVL 269          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.542e-23
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA +        R++LF+T+KL   +A       A++ SL  L ++Y+DLYLIHWP+S +    +                     W  + +S+ +GLT+SIG++NF    +D I++ +   P++NQ+ L
Sbjct:   55 GNEAAVGRAIAAS-----GVPRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWPVSQQGKHVDS--------------------WGGLMKSKEVGLTRSIGVANFHGHHLDDIISLSFFTPAVNQIEL 168          

HSP 2 Score: 52.7582 bits (125), Expect = 2.542e-23
Identity = 27/75 (36.00%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q +LR      G+   AY PLG          ++ + A+  IAEAHG+T AQV +RW ++ G  V+
Sbjct:  165 QIELHPLLNQAELRAVNAEHGIATEAYGPLGV-------GNLLSHSAVNAIAEAHGRTPAQVLIRWSLQLGNIVI 232          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.299e-23
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKE------DLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFAT--IPPSINQVSL 419
            E+ +G AI ++        RE++FIT+KLW           A+ KSL  L ++Y+DLYL+HWP+  K     +   + +P  E      D    ++   WE M+E  + G TK++G+SNFS   I  +L      + P+ NQ+ +
Sbjct:   59 EEEVGRAIKDS-----GVPREEIFITTKLWGTEQRDPEA--ALNKSLKRLGLDYVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQIEI 196          

HSP 2 Score: 53.1434 bits (126), Expect = 3.299e-23
Identity = 25/75 (33.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q +L  FCK KG+ V AYSP G+         +++ +A+  +A+ HG   AQ+ + W +++G  V+
Sbjct:  193 QIEIHPLLPQDELIAFCKEKGIVVEAYSPFGSANA-----PLLKEQAIIDMAKKHGVEPAQLIISWSIQRGYVVL 262          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.305e-23
Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSLPQTM 431
            E + +AL+   V +RE+LFIT+KLW  N    R   A+++SL  LQ++YLDLYL+HWP+ A                       Y   W+ M   Q+ GL KSIG+ NF    +  ++    + P INQ+ L   M
Sbjct:   55 EGVGKALKAASV-AREELFITTKLW--NDDQKRPREALQESLKKLQLDYLDLYLMHWPVPAID--------------------HYVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLM 167          

HSP 2 Score: 50.447 bits (119), Expect = 4.305e-23
Identity = 22/75 (29.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+ QQR+L  +     +   ++SPL       G   V + + ++++A+ +GKT AQ+ +RW ++ G+ V+
Sbjct:  160 QIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-----GGEGVFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVI 229          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
XYL1_TRIRE5.217e-2434.51NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
DKGA_SALTI5.236e-2436.03Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
AKC1H_RAT8.835e-2439.29Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
DKGA_ECO578.866e-2436.032,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
XYL1_KLULA1.496e-2335.37NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
DKGA_ECOLI1.501e-2336.032,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
CRO_RANTE2.533e-2336.81Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
Y4205_MYCGI2.542e-2331.65Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
YPR1_YEAST3.299e-2331.72Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
DKGA_SALTY4.305e-2335.292,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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