FC930019

Overview
NameFC930019
Unique NameFC930019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.476e-23
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            E++   LR   V  RE +FIT+KLW     ++  + A ++S   L ++Y+DLYLIHWP            G  + +KE    LD    W A E+  +    ++IG+SNF    ++ +L   T+ P +NQV L
Sbjct:   58 ESVGAGLRASGVP-REDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP-----------RGKDILSKEGKKYLD---SWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVEL 174          

HSP 2 Score: 53.5286 bits (127), Expect = 9.476e-23
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE+HP+  Q  LR FC  K + V A+SPL       G  +++ N  L  I   + KT AQV LRW +++ +  +
Sbjct:  171 QVELHPLNNQADLRAFCDAKQIKVEAWSPL-------GQGKLLSNPILSAIGAKYNKTAAQVILRWNIQKNLITI 238          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.229e-22
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKED----LSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E+ +G+AI   +  G V  RE +F TSKLW  +   + V P+++ SL  L ++Y+DLYLIH+P+S KP +E       LP  E        +D    WEAME+ +  GL KSIG+SNF+ ++++ IL    +   P  NQV
Sbjct:   58 EEEIGQAILSKIEDGTV-KREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNE------LLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQV 191          

HSP 2 Score: 37.7354 bits (86), Expect = 1.229e-22
Identity = 20/79 (25.32%), Postives = 44/79 (55.70%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ----VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE H    Q KL  +CK+  + + AY  LG    ++  N+    ++++  L  +A+ + +T A ++LR+ +++G+  +
Sbjct:  190 QVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINEDTPVLLDDPVLCAMAKKYKRTPALIALRYQLDRGIVAL 268          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.234e-22
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E+ +G AIA +   G+  +R+ LFIT+KLW      D    AI +SL+ L ++ +DLYL+HWP  A                      +Y   WE M E +  GLT+SIG+SN     ++ I+    + P++NQ+ L
Sbjct:   51 GNEEGVGAAIAAS---GI--ARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAAD--------------------NYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIEL 164          

HSP 2 Score: 50.8322 bits (120), Expect = 1.234e-22
Identity = 24/74 (32.43%), Postives = 41/74 (55.41%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTV 717
            ++E+HP +QQR++ ++     + + ++ PLG      G   +   E +   A AHGKT AQ  LRW +++G  V
Sbjct:  161 QIELHPAYQQREITDWAAAHDVKIESWGPLGQ-----GKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQKGFVV 229          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.013e-21
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E A+G AIA++        R +LF+T+KL   +        A++ SL  L ++Y+DLYLIHWP  ++ T                    Y   W  + + + LGLT+SIG+SNF  + +D I+  +   P++NQ+ L
Sbjct:   55 GNEAAVGRAIAKS-----GVPRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQGT--------------------YVDSWGGLMKLKELGLTRSIGVSNFHAQHLDDIIGLSFFTPAVNQIEL 168          

HSP 2 Score: 48.521 bits (114), Expect = 1.013e-21
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  Q +LR      G+   AYSPLG          ++ N A+  IA+A  +T AQV +RW ++ G  V+
Sbjct:  165 QIELHPLLNQAELRAVNAEHGIVTEAYSPLGV-------GSLLSNPAVTAIADAQDRTPAQVLIRWSLQLGNVVI 232          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.222e-21
Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKP---TSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E  +GE   E +  G V  RE +F   KLW  N     V P ++++L  L+++Y+DLY+I  P++ KP       +E G  L +K +L        WEA+E  +  GL KS+G+SNF+ ++++ +L    +   P  NQV
Sbjct:   61 EHEVGETFREKIAEGKVR-REDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDVVYPRDENGKWLYHKTNLC-----ATWEALEACKDAGLVKSLGVSNFNRQQLELLLNKPGLKHKPVCNQV 194          

HSP 2 Score: 50.447 bits (119), Expect = 2.222e-21
Identity = 27/79 (34.18%), Postives = 45/79 (56.96%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSN----QVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            +VE HP + Q KL +FC+   + + AYSPLG        N     ++++  L  + + + KT AQ+ LR+ V++GV V+
Sbjct:  193 QVECHPYFTQPKLLKFCQQHDIIIVAYSPLGTCRNPMWVNTSLPPLLKDTLLNSLGKKYKKTAAQIVLRFNVQRGVVVI 271          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.762e-21
Identity = 48/137 (35.04%), Postives = 83/137 (60.58%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E+ +G+AI   ++ G+V  RE +FIT+KLWC     + V P+++K    LQ+E++DL+++H+P+  K  + + +  +    K  L  +D+   WEA+E+    GL KSIG+SNF+ ++++ IL    +   P  NQV
Sbjct:   58 EEEIGQAIQSNIKAGIV-KREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMK--AGDNDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQV 191          

HSP 2 Score: 33.4982 bits (75), Expect = 3.762e-21
Identity = 24/79 (30.38%), Postives = 44/79 (55.70%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTR----W---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGV 711
            +VE H    Q KL ++CK K + + A+   GA+GT+    W    S  ++ +  L   A+   ++ A ++LR++V++GV
Sbjct:  190 QVECHVYNNQSKLLDYCKSKDIVLVAF---GALGTQRYKEWVDQDSPVLLNDPVLCGGAKXXXRSPALIALRYLVQRGV 265          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.762e-21
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 3
Query:    9 EKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTS---EEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATI--PPSINQV 413
            E+ +G+AI   +  G V  RE +F TSKLW      + V   ++K+L + Q++Y+DLY+IH+P++ +P       +E G  L        +D    WEAME+ +  GL KSIG+SNF+C++++ IL    +   P  NQV
Sbjct:   58 EEEVGQAIRSKIEDGTV-KREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLL-----FETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQV 191          

HSP 2 Score: 38.1206 bits (87), Expect = 3.762e-21
Identity = 22/80 (27.50%), Postives = 46/80 (57.50%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQ----VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVV 723
            +VE H    Q K+ ++CK K + + +Y  LG+   +   +Q    ++++  L  IA+ + +T A V+LR+ +++GV  ++
Sbjct:  190 QVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAKKYKQTPALVALRYQLQRGVVPLI 269          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.311e-21
Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 3
Query:   24 EAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            E + +AL+   V +R++LFIT+KLW  + H+ +   A++ SL  LQ++Y+DLYLIHWP                  K+D     Y   W  +   +  GL +SIG+ NF    +  ++    I P++NQ+ L
Sbjct:   55 EGVGKALKAAAV-ARDELFITTKLWNDDQHNPQ--QALETSLQKLQLDYVDLYLIHWP----------------DPKQD----HYVSAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIEL 163          

HSP 2 Score: 48.521 bits (114), Expect = 8.311e-21
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+ QQR+L  +     +   ++SPL       G   V + E ++++A+ + KT AQ+ +RW ++ G+ V+
Sbjct:  160 QIELHPLLQQRQLHAWNATHHIATESWSPLAQ-----GGKGVFDQEIIRKLAQQYNKTPAQIVIRWHLDSGLIVI 229          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.026e-20
Identity = 41/139 (29.50%), Postives = 68/139 (48.92%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E+  G AIA++   GL   R Q+++ +KLW     +D  + A + S+  L ++YLDLYLIHWP+  K                      +   ++A    +  G  +SIG+SNF  + +  ++    I P++NQ+ L
Sbjct:   51 GNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNL--------------------FVDTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIEL 164          

HSP 2 Score: 51.9878 bits (123), Expect = 4.026e-20
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  QR+LRE     G+   A+SPLG          ++ +  +  +AE+HGKT AQ  +RW ++ G  V+
Sbjct:  161 QIELHPLLPQRELRELHAQLGIATEAWSPLG-------QGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVI 228          
BLAST of FC930019 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.236e-20
Identity = 41/139 (29.50%), Postives = 67/139 (48.20%), Query Frame = 3
Query:    3 GTEKALGEAIAEALRLGLVTSREQLFITSKLWCHNAHHDRVIPAIKKSLSALQMEYLDLYLIHWPISAKPTSEEEEVGMSLPNKEDLSPLDYKGVWEAMEESQRLGLTKSIGLSNFSCKKIDTILTFATIPPSINQVSL 419
            G E+  G AIA++   GL   R Q+++ +KLW     +D  + A + S+  L ++YLDLYLIHWP+  K                      +   + A    +  G  +SIG+SNF  + +  ++    I P++NQ+ L
Sbjct:   51 GNEEQTGRAIAQS---GL--DRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNL--------------------FVDTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIEL 164          

HSP 2 Score: 51.9878 bits (123), Expect = 5.236e-20
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query:  496 KVEMHPVWQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVV 720
            ++E+HP+  QR+LRE     G+   A+SPLG          ++ +  +  +AE+HGKT AQ  +RW ++ G  V+
Sbjct:  161 QIELHPLLPQRELRELHAQLGIATEAWSPLG-------QGSLLAHPTVTGVAESHGKTAAQALIRWHMQLGNIVI 228          
The following BLAST results are available for this feature:
BLAST of FC930019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
P100_LEIMA9.476e-2333.33Probable reductase OS=Leishmania major GN=P100/11E... [more]
AKC1H_MOUSE1.229e-2239.01Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
DKGA_CORSC1.234e-2233.812,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
Y2161_MYCVP1.013e-2132.37Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
AK1D1_RABIT2.222e-2133.573-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
AK1CD_MESAU3.762e-2135.04Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
DIDH_RAT3.762e-2136.433-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
DKGA_YERPE8.311e-2132.582,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
Y1985_MYCSK4.026e-2029.50Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
Y1919_MYCSJ5.236e-2029.50Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC34002H08EF PostHarvC1 Citrus clementina cDNA clone C34002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930019 ID=FC930019; Name=FC930019; organism=Citrus clementina; type=EST; length=724bp
ACGGAACCGAGAAGGCTCTGGGAGAAGCAATAGCCGAAGCACTCAGGCTT
GGCCTCGTCACTTCCCGTGAACAACTCTTCATCACTTCCAAGCTCTGGTG
CCACAACGCTCATCACGACCGCGTTATCCCGGCAATAAAGAAGTCTCTCA
GTGCGCTTCAAATGGAATATTTAGACCTCTACCTCATTCACTGGCCCATC
AGTGCTAAGCCAACATCAGAGGAGGAAGAGGTTGGAATGTCTCTGCCTAA
TAAAGAGGACCTTTCACCTTTGGACTACAAGGGCGTGTGGGAAGCCATGG
AAGAATCTCAAAGGCTCGGCCTCACTAAGTCCATTGGTCTCAGCAACTTC
TCTTGCAAGAAGATTGACACTATACTCACCTTCGCTACCATCCCTCCTTC
CATCAATCAGGTGAGCTTGCCACAAACTATGTTTGTACGAACTCATATGA
CATAATATGATTGGTTGAATGAAAGCAACACGTATTTCTTTTTTGAAGGT
GGAGATGCACCCTGTCTGGCAACAAAGGAAGCTTAGAGAATTTTGCAAGG
TCAAGGGCATGAATGTCACGGCGTACTCACCTTTGGGAGCCGTAGGGACA
AGATGGGGAAGCAATCAAGTCATGGAGAATGAAGCACTAAAGCAGATTGC
AGAGGCTCATGGCAAGACTGTCGCTCAGGTTTCTCTTAGATGGATAGTTG
AGCAAGGAGTGACAGTTGTTGTCA
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