FC930022

Overview
NameFC930022
Unique NameFC930022
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.462e-29
Identity = 74/180 (41.11%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  129 SWVVKLLLSKDYFVRGTVREPSD-EKNTHLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAKVKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYCRTTN--NW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            SW+V  L+   Y VR TVR+P + +K + L +L  A   L ++KADL +  S   AI GC GVFH               E+I+P +KG L+++KACL+AK  R ++ +S A   LN    +  + DE+CWSD E+CR      W Y +SKT AE EA +FAK   +DV+T+ P L++GP
Sbjct:    2 SWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPEN-EMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGT-LNVTEDQKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGP 179          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAK-VKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKEYC---RTTNNWYCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            VCVTGA G++ SW+V  LL + Y VR TVR+P + K   HL +L KA  NL L+KAD+    S   AI GC GVFH               E+I+P + G LN++K+C++AK VK+ I  +SG  V +     +  + DET  SD ++    + T   Y +SK  AE   +E AK   +D +++ P L++GP
Sbjct:   20 VCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFH-LATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEH--QKPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGP 208          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAK-VKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKE--YCRTTNNW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            VCVTGA G++ SW+V  LL + Y V  TVR+P ++K   HL +L KA  NL L+KADL    S   AI GC GVFH               E+I+P V+G L+++++C +A  VKR++  SS   + +  +  +    D+T WSD +  Y +    W Y  SK  AE  A+E AK+  +D +++ P L++GP
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFH-VATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQ--QKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGP 206          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 73/192 (38.02%), Postives = 108/192 (56.25%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNT-HLYKLEKASENLKLFKADLLDYDSVKSAIVGCNGVFHXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAK-VKRVIVVSSGAAVGLNPRWPKGQIMDETCWSDKE--YCRTTNNW-YCLSKTEAESEALEFAKRTGLDVVTVCPNLILGP 656
            V VTG  G++ SW+V  LL + Y V  TVR+P ++K   HL +L KA  NL L+KADL    S   AI GC GVFH               E+I+P V+G L+++++C +A  VKR++  SS     L+ +  +    DET WSD +  Y +    W Y +SK  AE  A+E A++  +D +++ P L++GP
Sbjct:   20 VWVTGGAGFIGSWLVMRLLERGYNVHATVRDPENQKKVKHLLELPKADTNLTLWKADLAVEGSFDEAIQGCQGVFH-VATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGT--LDVQEDQKLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGP 208          
BLAST of FC930022 vs. ExPASy Swiss-Prot
Match: YKJ7_SCHPO (Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe GN=SPAC513.07 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 68/209 (32.54%), Postives = 99/209 (47.37%), Query Frame = 3
Query:   96 VCVTGAGGYLASWVVKLLLSKDYFVRGTVREPSDEKNTHLYKLEKASENLKLFKA--DLLDYDSVK--SAIVGCNGVF-------HXXXXXXXXXXXXXXXELIEPAVKGTLNVLKACLEAK-VKRVIVVSSGAAVG---LNPRWPKGQIMDETCWSDKEY--CRTTNNW---YCLSKTEAESEALEFA--KRTGLDVVTVCPNLILGP 656
            V VTG  G++ + V + LL   Y VRGTVR            +EKA E ++L     D +++  VK  SA    +GV        H               +L++PAVKGTL +L+A    K +KR+++ SS AAVG   ++P     ++  E  W+   Y    TT+N    YC SK  AE  A E+   K+   D+ T+ P  + GP
Sbjct:    6 VLVTGVTGFIGAHVAEQLLQAGYRVRGTVRS-----------MEKADELIRLNPGLKDKIEFVIVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPH--NNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGP 201          
The following BLAST results are available for this feature:
BLAST of FC930022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
DFRA_MEDSA5.462e-2941.11Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
DFRA_ANTMA9.318e-2939.06Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_PETHY1.589e-2838.54Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_SOLLC3.915e-2738.02Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
YKJ7_SCHPO4.202e-1332.54Putative uncharacterized oxidoreductase C513.07 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34002H12EF PostHarvC1 Citrus clementina cDNA clone C34002H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930022 ID=FC930022; Name=FC930022; organism=Citrus clementina; type=EST; length=719bp
GACAGACCCAGAAAGAGAGAAACAATCTTTTAAGTTAGTTTATAGACTTG
AGTGGGTGTTTTAAGGTTTTGGAAATGGCGTTAGAGAAAGGAAGAGTTTG
TGTAACAGGTGCTGGTGGGTATCTTGCCTCGTGGGTCGTCAAGCTCCTGC
TCTCCAAAGACTATTTTGTTCGTGGAACCGTGAGAGAACCCAGTGATGAG
AAAAATACTCATTTGTATAAACTTGAGAAAGCCTCTGAGAATCTGAAACT
CTTCAAGGCAGACTTACTGGATTATGATTCTGTTAAATCTGCCATTGTTG
GATGCAACGGTGTATTCCATGTTGCTAGCCCTGTTCCATCATCCAGTGTT
CCAAATCCTGAGGTGGAACTGATTGAGCCGGCTGTAAAGGGCACACTCAA
TGTGCTCAAAGCATGTCTTGAGGCAAAAGTTAAGCGAGTTATTGTAGTGT
CTTCTGGAGCTGCTGTTGGCCTGAACCCCAGATGGCCCAAGGGCCAAATT
ATGGATGAGACTTGTTGGTCTGATAAGGAATACTGCAGAACAACGAATAA
CTGGTACTGTCTTTCAAAAACCGAAGCAGAAAGTGAAGCTCTGGAGTTTG
CAAAAAGAACTGGGCTTGATGTTGTAACCGTTTGTCCTAACCTTATTTTG
GGGCCTCTTCTGCAGTCCACGTGAATTCAGTAGCTTATTCTCATTAGCGA
TTGAAGAAGGTATGATCAT
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