FC930029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_CHICK (40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57 Identity = 118/204 (57.84%), Postives = 143/204 (70.10%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLGTPLTLQRKRGRMQKRAENCQ 722 MK NI+ P TGCQK +E+DD++ +R F++KR++ EV D+LGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRL TP LQ KR R+ + + Q Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQ 200
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.409e-56 Identity = 116/204 (56.86%), Postives = 143/204 (70.10%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLGTPLTLQRKRGRMQKRAENCQ 722 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CI +LSVLNLVI+KKGE D+PGLTD+ PR GPKRASKIRKLFNL+KEDDVR+YV RR T + K +KAP+IQRL TP LQ KR R+ + + Q Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQ 200
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_XENLA (40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.147e-56 Identity = 116/204 (56.86%), Postives = 142/204 (69.61%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLGTPLTLQRKRGRMQKRAENCQ 722 MK NI+ P TGCQK +E++D++KLR F++KR++ EV D LG+E+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIV+KGE D+PGLTD PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRL TP LQ KR R+ + + Q Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQ 200
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_BRAFL (40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.196e-55 Identity = 115/194 (59.28%), Postives = 139/194 (71.65%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS-KAPKIQRLGTPLTLQRKR 689 MK NI+ P TGCQK +E+DD++KLR F++KR+S ++ ++LG+E+KGY+ +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVI+KKGE D+PGLTDT PR GPKRA +IRKLFNL+KEDDVR+YV RR K GKK K PKIQRL TP LQRKR Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPKIQRLITPQRLQRKR 190
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.012e-54 Identity = 116/205 (56.59%), Postives = 136/205 (66.34%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLGTPLTLQRKRGRMQKRAENCQA 725 MK NI+ P G QK EIDD+ ++R FFDKRI QEV+G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P R++LLL + C+ IV PDL+VL LVIVKKGE +L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKIQRL TP LQRKR + + N QA Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQA 200
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_GLOMM (40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.012e-54 Identity = 115/197 (58.38%), Postives = 136/197 (69.04%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLGTPLTLQRKRGRM 698 MK N++ P TGCQK E++D+ KLR F++K + Q V D LG+E+KGY+ +I GG DKQGFPMKQGVLT RVRLLL +G C+ CIV ++SVL LVIVKKGE D+PGLTDT PR GPKRASKIRKL+NLSK DDVR YV RR K KK +SKAPKIQRL TP+ LQRKR R+ Sbjct: 1 MKLNVSYPATGCQKLFEVNDEHKLRVFYEKHMGQVVEADILGDEWKGYMLRISGGNDKQGFPMKQGVLTHDRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVIVKKGEKDIPGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYV--IRRPLPAKDNKKAISKAPKIQRLITPVVLQRKRRRI 193
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.255e-54 Identity = 114/197 (57.87%), Postives = 136/197 (69.04%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLGTPLTLQRKRGRM 698 MK N++ P TGCQK E+ D+ KLR F++KR+ Q V D LG+E+KGY +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV ++SVL LV++KKGE D+PGLTDT PR GPKRASKIRKL+NLSKEDDVR++V RR K KK SKAPKIQRL TP+ LQRK R+ Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRI 193
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.255e-54 Identity = 114/197 (57.87%), Postives = 136/197 (69.04%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLGTPLTLQRKRGRM 698 MK N++ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPKIQRL TP+ LQRKR R+ Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRL 193
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.024e-54 Identity = 116/196 (59.18%), Postives = 133/196 (67.86%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLGTPLTLQRKRGR 695 MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQGFPM QGVL P RVRLLL G PC+ CIV DL+VL L IVK+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRL TP TLQ KR R Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHR 193
BLAST of FC930029 vs. ExPASy Swiss-Prot
Match: RS6A_SCHPO (40S ribosomal protein S6-A OS=Schizosaccharomyces pombe GN=rps6a PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 6.562e-54 Identity = 115/196 (58.67%), Postives = 133/196 (67.86%), Query Frame = 3 Query: 111 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLGTPLTLQRKRGR 695 MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQGFPM QGVL P RVRLLL G PC+ CIV DL+VL L I+K+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRL TP TLQ KR R Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHR 193 The following BLAST results are available for this feature:
BLAST of FC930029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930029 ID=FC930029; Name=FC930029; organism=Citrus clementina; type=EST; length=728bpback to top |