FC930041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLH Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_MESAU (Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus auratus GN=ETF1 PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLH Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_HUMAN (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLH Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_BOVIN (Eukaryotic peptide chain release factor subunit 1 OS=Bos taurus GN=ETF1 PE=2 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKLYNKVPPNGLV+Y GTIVT++GKEKKV IDFEPF+PIN SLYLCDNKFHT+AL LL D KFGFIV+DG+G LFGTL GNTREVLH Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_PODAN (Eukaryotic peptide chain release factor subunit 1 OS=Podospora anserina GN=SU2 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.131e-64 Identity = 119/167 (71.26%), Postives = 135/167 (80.84%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 + E +KN RGNGTSMISLI+PP+DQ+SR KML +E+GTASNIKSRVNRQSVL AITS QQRLKLYNKVPPNGLV+Y G I+T +GKE+KV IDFEPF+PIN SLYLCDNKFHT+AL ELLESD KFGFIVMDGNG LFGTLSGNTR+++H Sbjct: 5 NANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPINTSLYLCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNTRDIVH 171
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_CAEEL (Eukaryotic peptide chain release factor subunit 1 OS=Caenorhabditis elegans GN=erf-1 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62 Identity = 114/143 (79.72%), Postives = 128/143 (89.51%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 RGNGTSMISLI+PP+DQV+R+ +ML +E+GTASNIKSRVNR SVLGAITS Q RLKLYNKVPPNGLV+Y GTI+TD+GKEKKV IDFEPF+ IN SLYLCDNKFHT+AL LL D+KFGFI+MDGNG LFGTL GNTREVLH Sbjct: 36 RGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKEKKVNIDFEPFKAINTSLYLCDNKFHTEALQGLLADDNKFGFIIMDGNGCLFGTLQGNTREVLH 178
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_CRYHO (Eukaryotic peptide chain release factor subunit 1 OS=Cryptosporidium hominis GN=erf1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.266e-60 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 RGNGTSMISL++ P+D++SR++KML DE+GTASNIKSRVNR SVL AITS QQRLKLYN+ P NGLV+Y GT++T+DGKEKKV IDFEPF+PIN SLYLCDNKFH DAL ELLE+DDKFGFI++DGNG L+G + G++REVL Sbjct: 24 RGNGTSMISLVIKPKDEISRISKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRTPQNGLVVYCGTLITEDGKEKKVNIDFEPFKPINTSLYLCDNKFHVDALKELLETDDKFGFIIVDGNGALYGVVQGSSREVL 165
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 4.598e-59 Identity = 115/167 (68.86%), Postives = 128/167 (76.65%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 D Q DK RGNGTSMISLI+ P DQ+++V KML +E+GTASNIKSRVNR SVLGAITSAQQRLKLY KVP NGLV+Y GT+VTD+GKEK V ID EPF+PIN SLYLCDNKFHT L ELLESD+KFGFIV+DGNG LFG L G+TR VLH Sbjct: 6 DQQNADKQVEQWKIKKLIKNLEAARGNGTSMISLIIRPGDQIAKVNKMLAEEYGTASNIKSRVNRLSVLGAITSAQQRLKLYTKVPDNGLVIYCGTMVTDEGKEKPVRIDIEPFKPINTSLYLCDNKFHTAPLGELLESDEKFGFIVVDGNGALFGLLCGSTRTVLH 172
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_YEAST (Eukaryotic peptide chain release factor subunit 1 OS=Saccharomyces cerevisiae GN=SUP1 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.672e-58 Identity = 109/164 (66.46%), Postives = 127/164 (77.44%), Query Frame = 2 Query: 158 ETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 E +KN RGNGTSMISL++PP+ + KML DE+GTASNIKSRVNR SVL AITS QQ+LKLYN +P NGLVLY G I+T+DGKEKKVT D EP++PIN SLYLCDNKFHT+ L+ELL++DDKFGFIVMDG GTLFG++SGNTR VLH Sbjct: 4 EVEKNIEIWKVKKLVQSLEKARGNGTSMISLVIPPKGLIPLYQKMLTDEYGTASNIKSRVNRLSVLSAITSTQQKLKLYNTLPKNGLVLYCGDIITEDGKEKKVTFDIEPYKPINTSLYLCDNKFHTEVLSELLQADDKFGFIVMDGQGTLFGSVSGNTRTVLH 167
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_SCHPO (Eukaryotic peptide chain release factor subunit 1 OS=Schizosaccharomyces pombe GN=sup45 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.192e-52 Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = 2 Query: 224 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 GNGTSMI+LI+PP +Q+SR + ML +E+GTASNIKSRVNR SVL AITS ++RLKLYNKVP NGLV+Y G ++ + K +K+ IDFEPF+PIN S YLCDNKFHT+AL ELLESD +FGFIVMDG+ TL+G +SG+ REVL Sbjct: 26 GNGTSMITLIIPPGEQISRYSNMLAEEYGTASNIKSRVNRLSVLSAITSTRERLKLYNKVPDNGLVIYCGEVIMEGNKTRKLNIDFEPFKPINTSQYLCDNKFHTEALAELLESDQRFGFIVMDGHQTLYGVVSGSAREVL 166 The following BLAST results are available for this feature:
BLAST of FC930041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930041 ID=FC930041; Name=FC930041; organism=Citrus clementina; type=EST; length=679bpback to top |