FC930041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.529e-49 Identity = 94/169 (55.62%), Postives = 125/169 (73.96%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNGTLFGTL GNT+EVLH Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGTLFGTLQGNTKEVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.314e-49 Identity = 94/169 (55.62%), Postives = 124/169 (73.37%), Query Frame = 2 Query: 149 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNG LFGTL GNTREVLH Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGALFGTLQGNTREVLH 170
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.004e-46 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLH 649 RG+GTSM+SLI+PP+ Q++ TK++ DEF A+NIK RVNRQSV A+ SA QRLKLY + P NGL+LY G ++ ++GKE K+ IDFEP++PIN SLY CD+KFH D L LLE+D FGFIVMDG G L+ L GNT+ VL+ Sbjct: 27 RGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKEIKLLIDFEPYKPINTSLYFCDSKFHVDELGSLLETDPPFGFIVMDGQGALYANLQGNTKTVLN 169
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.299e-45 Identity = 84/144 (58.33%), Postives = 115/144 (79.86%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHS 652 RG GTS+IS+ M P++Q+S + L +E+GTASNIKS N+ SV AIT++ RLK YN++PPNGL+LY GT++T + KEKK+T+D EPF+P++ SLYLCDNKFHT+ L+ +LESD+KFGFIV+DG+GT + TL G+ +E L S Sbjct: 29 RGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRSLYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYATLCGSVKEKLSS 172
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.936e-45 Identity = 88/146 (60.27%), Postives = 113/146 (77.40%), Query Frame = 2 Query: 224 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHSSVL 661 G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL AITSA RLKLYN++PPNGL +Y G I +DGK KV ID+ P++PI+ +YLCD+KFHT+ L ELL +DD FGFI+MDG TL TLSG R +L S + Sbjct: 35 GSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGKNTKVVIDYTPYKPISNFIYLCDSKFHTEHLRELLTNDDTFGFIIMDGKETLMATLSGTVRTILDRSTV 179
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.100e-44 Identity = 84/142 (59.15%), Postives = 112/142 (78.87%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 +G+GTSMI+LI+ +DQ++ +ML +E G ASNIKSRV RQ+V A+TS ++LKLYNK PPNGLV++ G + +DG EK + ID EPF+PIN +LY CD+ FHT+ + +LLE +DKFGFI+MDGNG+LFGTL G+TR VL Sbjct: 30 KGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGEKMIKIDLEPFKPINTTLYKCDSVFHTEEVRKLLEDNDKFGFIIMDGNGSLFGTLQGSTRTVL 171
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.216e-43 Identity = 83/143 (58.04%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 +GNGTSM+SLI+PP+D +++ K+L E A NIKSR+ +QSV+ AITS +++LKLY + P NGL LY G I +DGK EKK+ DFEPFRPIN LY C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 32 KGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGKTEKKINFDFEPFRPINQFLYFCGGKFQTEPLLSLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.074e-43 Identity = 81/143 (56.64%), Postives = 107/143 (74.83%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.074e-43 Identity = 81/143 (56.64%), Postives = 107/143 (74.83%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.713e-42 Identity = 81/142 (57.04%), Postives = 106/142 (74.65%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 +G+GTSMISLI+ +DQ++ KML DE G ASNIKSRV RQ+V A+TS ++LKLYNK P NGL++Y G D EK ID EPF+PIN SLY CD+ FHT+ + +LLE +D+FGF++MDGNG+LFG++ G TR V+ Sbjct: 30 KGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGEKMFKIDMEPFKPINTSLYRCDSVFHTEEVKKLLEDNDRFGFLIMDGNGSLFGSVQGATRTVI 171 The following BLAST results are available for this feature:
BLAST of FC930041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930041 ID=FC930041; Name=FC930041; organism=Citrus clementina; type=EST; length=679bpback to top |