FC930041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: RF1_AERPE (Peptide chain release factor subunit 1 OS=Aeropyrum pernix GN=prf1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15 Identity = 48/138 (34.78%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 233 TSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 T ++SL +PP +S V +L E+ NIK + RQ+V A+++A RL++ PPNGLVL+ G D K F P PI Y D +F TD L +++E ++ G I+++ + G L G EVL Sbjct: 32 TVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRALSAAMDRLQMLTSTPPNGLVLFCG---EDMSTGKFECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIGLLKGARLEVL 166
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: RF1_PYRAE (Peptide chain release factor subunit 1 OS=Pyrobaculum aerophilum GN=prf1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 2 Query: 221 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHS 652 +G T++I+L + + V +L E+ TA+NIK + R V + LK K P NG+ ++ G + + G + V P +PIN Y+CD FHT+ L + L + +G +V++ + L G EV+ S Sbjct: 30 KGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICDTAFHTELLEDQLHAGVVYGIVVIERGEAVIALLKGGQWEVVKS 173
BLAST of FC930041 vs. ExPASy Swiss-Prot
Match: RF1_SULSO (Peptide chain release factor subunit 1 OS=Sulfolobus solfataricus GN=prf1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 233 TSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTG-TIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 646 T ++SL +PP + V +L E+ A NIK + R +VL AI +A RL K+ NGLVL+ G T+D K F P + Y D +FH + L +++E +G I+++ + G L G E+L Sbjct: 28 TVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLNKIPKIDGNGLVLFCGENFDTEDFK----CFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKGARIEIL 162 The following BLAST results are available for this feature:
BLAST of FC930041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930041 ID=FC930041; Name=FC930041; organism=Citrus clementina; type=EST; length=679bpback to top |