FC930042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_SYNFM (ATP-dependent Clp protease proteolytic subunit OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L ++RI++LG + V +I+A+ L+L+ ED +K I+ YINS G G T AIYD M ++KP + TLC+ Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG--------GLVTAGLAIYDTMQFIKPNVSTLCM 93
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_LAWIP (ATP-dependent Clp protease proteolytic subunit OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L K+RIV LG V LI A+ L+L+ +D EK IYLYINS G G T AIYD M Y+ P + T+C+ Sbjct: 24 DIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDPEKEIYLYINSPG--------GSVTAGLAIYDTMNYITPNVATVCM 98
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_DESMR (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G + AIYD M YV PP+ TLC+ Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GVVSAGLAIYDTMQYVMPPVSTLCL 93
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L K+R +++G V L++A+ L+L+ ED EK I+LYINS G G T AIYD M Y+KP + T+C+ Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG--------GVITAGMAIYDTMQYIKPDVSTICI 94
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_ACTPJ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 574 D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLC 92
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP7 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 574 D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLC 92
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP2 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=clpP PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 574 D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLC 92
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G AIYD M +++P + T+C+ Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GSVYAGMAIYDTMQHIQPDVSTICI 91
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 329 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G AIYD M +++P + T+C+ Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GSVYAGMAIYDTMQHIQPDVSTICI 91
BLAST of FC930042 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 269 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 577 P+ T +P+ + + D+ + L RI++LG V ++A+ LYL ED+ KPIYLYINS G G T AIYD M YVK + T+CV Sbjct: 2 PIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDVVTICV 96 The following BLAST results are available for this feature:
BLAST of FC930042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930042 ID=FC930042; Name=FC930042; organism=Citrus clementina; type=EST; length=628bpback to top |