FC930045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.766e-30 Identity = 72/213 (33.80%), Postives = 118/213 (55.40%), Query Frame = 2 Query: 89 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHGF 724 +IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY +A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKIE+LV++T+ L Q+ F++Q +++ MW +N+ S C GF Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLIIIFIIVMSYCDGF 213
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.138e-30 Identity = 72/213 (33.80%), Postives = 121/213 (56.81%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKF-TYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHG 721 S++Y+ VARGTV+LAE + + N ++IA Q L+K+P + +Y+ D + F+ +G T +A E AGR+IP +FLE + + F + YG +A A ++N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++ FR+Q + +W +N CHG Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29 Identity = 65/188 (34.57%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNV 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29 Identity = 66/188 (35.11%), Postives = 113/188 (60.11%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R +FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNI 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29 Identity = 69/190 (36.32%), Postives = 111/190 (58.42%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29 Identity = 65/188 (34.57%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29 Identity = 65/188 (34.57%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28 Identity = 65/188 (34.57%), Postives = 111/188 (59.04%), Query Frame = 2 Query: 86 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 649 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC930045 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.678e-26 Identity = 67/191 (35.08%), Postives = 108/191 (56.54%), Query Frame = 2 Query: 74 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGSTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQN 646 M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ EN + + E G QIP FL +++ F + YG + + + + F L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S++ F+ ++RK+W QN Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187 The following BLAST results are available for this feature:
BLAST of FC930045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930045 ID=FC930045; Name=FC930045; organism=Citrus clementina; type=EST; length=735bpback to top |