FC930053

Overview
NameFC930053
Unique NameFC930053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDA_STAAC (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain COL) GN=aldA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  240 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            L ING+FV  +S +T    +P TG+ ++H+   + +DV+ AV  A++AF+   W   +  ER++++    D L    D+IA +ET +NGKP  ++   ++P   R F Y+A   +  +G     D        HEPIGV G ++ WNFP+L+ AWK+ PA
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVKVAQEAFES--WSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPA 172          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDA_STAAB (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  240 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            L ING+FV  +S +T    +P TG+ ++H+   + +DV+ AV  A++AF+   W   +  ER++++    D L    D+IA +ET +NGKP  ++   ++P   R F Y+A   +  +G     D        HEPIGV G ++ WNFP+L+ AWK+ PA
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVEVAQEAFES--WSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPA 172          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDA_STAA8 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain NCTC 8325) GN=aldA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  240 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            L ING+FV  +S +T    +P TG+ ++H+   + +DV+ AV  A++AF+   W   +  ER++++    D L    D+IA +ET +NGKP  ++   ++P   R F Y+A   +  +G     D        HEPIGV G ++ WNFP+L+ AWK+ PA
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVKVAQEAFES--WSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPA 172          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDA_STAA3 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain USA300) GN=aldA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  240 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            L ING+FV  +S +T    +P TG+ ++H+   + +DV+ AV  A++AF+   W   +  ER++++    D L    D+IA +ET +NGKP  ++   ++P   R F Y+A   +  +G     D        HEPIGV G ++ WNFP+L+ AWK+ PA
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVKVAQEAFES--WSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPA 172          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 65/166 (39.16%), Postives = 89/166 (53.61%), Query Frame = 3
Query:  222 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            + D  +L I+G + D+ S  TF  ++P  G+V+  V     EDV RAV +A K   +  W  MTA ERS+I+ R  D+L   NDE+AALET D GK F ++   +V     +  YYAG    I+G   P      V T  EP+GV   I  WN+P+ +  WK  PA
Sbjct:    3 RFDLQKLYIDGGYSDAGSDATFEAINPANGEVLAQVQRATKEDVERAVVSAEKG--QKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETQYVDVVTGADVLEYYAGLVPAIEGEQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPA 166          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ABDH_SERP5 (Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=Spro_3642 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 3
Query:  234 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            +QLLINGQ V +  G   P  +P TG+V+  VAE  AE V++AV AA  AF+   W + T  ER++ +L+ ADL++ H +  A LE+ + GKP+      E+P    +FR++AG +  + GL A      H   +  +P+GV   I PWN+PL+M AWK+ PA
Sbjct:    3 SQLLINGQLV-TGQGALLPVYNPATGEVVVQVAEASAEQVDQAVLAADAAFEH--WGQTTPKERAEHLLKLADLIDSHAETFARLESINCGKPYHCVLNDELPGVADVFRFFAGASRCLSGLAAGEYLAGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 162          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = 3
Query:  240 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            L ING+FV  +S +T    +P TG+ ++H+   + +DV+ AV  A+ AF+   W   +  ER++++    D L    D+IA +ET +NGKP  ++   ++P   R F Y+A   +  +G     D        HEPIGV G ++ WNFP+L+ AWK+ PA
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVKVAQDAFES--WSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPA 172          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.677e-27
Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 3
Query:  237 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            QL I+G    + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W  MTA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T HEP+GV   I  WN+P+ +  WK  PA
Sbjct:    8 QLYIHGGCTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRHEPLGVVAGIGAWNYPIQIALWKSAPA 166          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 62/166 (37.35%), Postives = 92/166 (55.42%), Query Frame = 3
Query:  222 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            + +  +L I+G +VD+++ +TF +++P  G+V+  +     EDV RAV AA K   +  W  MTA ERS+I+ R  D+L   NDE+AALET D GK   ++   ++     +  YYAG    I+G   P      V T  EP+GV   I  WN+P+ +  WK  PA
Sbjct:    3 RFELQKLYIDGGYVDASNTETFDSINPANGEVLAKIQRASKEDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPA 166          
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ABDH_ECOUT (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 3
Query:  237 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPA 719
            +LLING+ V S  G+  P  +P TGDV+  +AE  AE VN AV AA  AF E  W + T   R++ +L+ AD++E +    A LE+ + GKP   +   E+P    +FR++AG A  + GL A      H   +  +P+GV   I PWN+PL+M AWK+ PA
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 162          
The following BLAST results are available for this feature:
BLAST of FC930053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
ALDA_STAAC2.997e-2735.63Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAB2.997e-2735.63Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAA82.997e-2735.63Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAA32.997e-2735.63Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
BETB_PSEFS3.915e-2739.16Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
ABDH_SERP53.915e-2740.49Gamma-aminobutyraldehyde dehydrogenase OS=Serratia... [more]
ALDA_STAAS5.113e-2735.63Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
BETB_ECO7I6.677e-2738.51Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_PSESM8.721e-2737.35Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
ABDH_ECOUT8.721e-2740.74Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionC34003C07EF PostHarvC1 Citrus clementina cDNA clone C34003C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930053 ID=FC930053; Name=FC930053; organism=Citrus clementina; type=EST; length=720bp
AGGGAGGAAAAAAAAAAAAAGATTTCCTTAAAGTTGTGATGGCTGCAAGA
AGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTTCTTCACCTACTCT
GTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCTGCTGCTGCTGCTG
CCGCCTCCTGCGGATACAGCACGGCTTCTTCTGCTGCTGCTGCTGCTGAA
GATCCAATTACTCCGCCTGTTAAAGTTGATTATACTCAGCTTCTAATTAA
TGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTTCCCACATTAGACC
CCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGGTGAGGCTGAAGAC
GTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTGATGAAGGACCGTG
GCCTAGGATGACTGCTTATGAAAGGTCAAAAATAATTTTGCGCTTCGCTG
ATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCTTGAGACTTGGGAT
AACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAGTACCAATGACCAC
GCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAGATTCAGGGTCTCA
CTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTTGCACGAACCAATT
GGTGTAGCAGGTCAAATTATCCCATGGAACTTTCCCCTTCTCATGTTTGC
TTGGAAAGTTGGGCCTGCAT
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