FC930053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.526e-42 Identity = 82/168 (48.81%), Postives = 112/168 (66.67%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +++ YT++ IN ++ +S SG+ FP +P TG+ I + E + D ++AV AAR AF G W RM A ER ++ + ADL+ER +A +E+ ++GKPF Q+ ++ + RYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PA Sbjct: 33 LEIKYTKIFINNEWQNSESGRIFPVYNPATGEQICDIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPA 200
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.526e-42 Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +++ +T++ IN ++ +S SG+ FP +P TG+ I + E + D ++AV AAR AF G W RM A ER +++ + ADL+ER +A +E+ ++GKPF Q+ ++ + RYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PA Sbjct: 33 LEIKHTKIFINNEWQNSESGRVFPVYNPATGEQICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPA 200
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.627e-42 Identity = 81/168 (48.21%), Postives = 111/168 (66.07%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ YT++ IN ++ DS SGK FP +P T + + V EG+ EDV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E+ + GK + + ++ + RY AGWADKIQG T P DG + T HEPIGV GQIIPWNFPL+M WK+GPA Sbjct: 16 LKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPA 183
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 7.349e-42 Identity = 83/168 (49.40%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ +T++ IN ++ DS SGK FP L+P T +VI HV EG+ DV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F + +++ + + +Y AGWADKI G T P+DG T EPIGV GQIIPWNFPLLMF WK+GPA Sbjct: 16 LKIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPA 183
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.253e-41 Identity = 82/174 (47.13%), Postives = 113/174 (64.94%), Query Frame = 3 Query: 204 PITPP-VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 P+ P +K+ YT++ IN ++ DS SGK FP +P T + + V EG+ DV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E+ + GK + + ++ + RY AGWADKIQG T P DG + T HEPIGV GQIIPWNFPL+M WK+GPA Sbjct: 10 PVLPTDLKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPA 183
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41 Identity = 81/168 (48.21%), Postives = 112/168 (66.67%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ +T++ IN ++ +S SGK FP L+P T +VI HV EG+ DV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F + +++ + +Y AGWADKI G T P+DG T EPIGV GQIIPWNFP+LMF WK+GPA Sbjct: 16 LKIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPA 183
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.763e-41 Identity = 81/168 (48.21%), Postives = 111/168 (66.07%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ YT++ IN ++ DS SGK FP L+P T + I + EG+ DV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E+ + GK F + ++ + RY AGWADKIQG T P DG + T HEP+GV GQIIPWNFPL+M WK+GPA Sbjct: 11 LKIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPA 178
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40 Identity = 80/168 (47.62%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD-EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +KV++T++ IN +FVDS SGKTF T++P TG+ + V EG+ D+++AV+AAR AF + + + A +R +++ + ADL+E H ++ LET DNGKPF S + M ++ RYYAG+ADKI G T PADG T HEP+GV G I PWNFPL + A K+ PA Sbjct: 13 LKVEFTKIFINNEFVDSVSGKTFATINPSTGEKLAEVQEGDKADIDKAVAAARAAFKRDAEYRKHDASDRGRLLFKLADLIEAHRVQLRTLETLDNGKPFAMSYLGDTLMAQKVLRYYAGFADKIVGQTIPADGNVFCYTRHEPVGVVGAITPWNFPLHLAASKIAPA 180
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40 Identity = 80/168 (47.62%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ +T++ IN ++ DS S K FP L+P T +VI HV EG+ DV++AV AAR+AF G PW M A ER +++ + ADL+ER +A +E+ + GK F + +V ++ + +Y+AGWADKI G T P+DG T EPIGV GQIIPWN PL++F WK+GPA Sbjct: 16 LKIQHTKIFINNEWHDSVSSKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPA 183
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.386e-40 Identity = 80/168 (47.62%), Postives = 108/168 (64.29%), Query Frame = 3 Query: 219 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +K+ YT++ IN ++ DS SGK F +P + I VAEG+ D+++AV AARKAF+ G PW M A ER +++ + ADL+ER +A +E D GK F + ++ + RY AGWADKI G T P DG + T HEP+GV GQIIPWNFPL+MF WK+ PA Sbjct: 24 LKIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPA 191 The following BLAST results are available for this feature:
BLAST of FC930053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930053 ID=FC930053; Name=FC930053; organism=Citrus clementina; type=EST; length=720bpback to top |