FC930053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ASTD_BURMS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=astD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 234 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFP 686 T+L I+G + D A G F + +P TG+ + A A+DV RAV++AR+AF W + R I+ RFA LL + +A + + GKP ++ M ++ A + ++ +P ADG ++ H P GV P+NFP Sbjct: 2 TELFIDGAWRDGA-GPVFASRNPGTGEPVWEGAGASADDVERAVASARRAF--AAWSALDLDARCAIVKRFAALLVERKEALATMIGRETGKPLWEARTEVASMAAKVDVSIAAYHERTGERRSPTADGVAVLR--HRPHGVVAVFGPYNFP 148
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ASTD_BURMA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia mallei GN=astD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 234 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFP 686 T+L I+G + D A G F + +P TG+ + A A+DV RAV++AR+AF W + R I+ RFA LL + +A + + GKP ++ M ++ A + ++ +P ADG ++ H P GV P+NFP Sbjct: 2 TELFIDGAWRDGA-GPVFASRNPGTGEPVWEGAGASADDVERAVASARRAF--AAWSALDLDARCAIVKRFAALLVERKEALATMIGRETGKPLWEARTEVASMAAKVDVSIAAYHERTGERRSPTADGVAVLR--HRPHGVVAVFGPYNFP 148
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: A16A1_HUMAN (Aldehyde dehydrogenase family 16 member A1 OS=Homo sapiens GN=ALDH16A1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 44/158 (27.85%), Postives = 74/158 (46.84%), Query Frame = 3 Query: 246 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 719 +NG+++ + P DP TG+ + + +AEDV AV AAR AF W R++ + R A+++++H + LE+ G+ + +V + +L Y+A A + A EP+GV G I+P F L W++ PA Sbjct: 44 VNGKWLKPEHRNSVPCQDPITGENLASCLQAQAEDVAAAVEAARMAFK--GWSAHPGVVRAQHLTRLAEVIQKHQRLLWTLESLVTGRAVREVRDGDVQLAQQLLHYHAIQASTQEEALAG----------WEPMGVIGLILPPTFSFLEMMWRICPA 189
BLAST of FC930053 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 41/155 (26.45%), Postives = 79/155 (50.97%), Query Frame = 3 Query: 240 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 701 L+ING+ + + T+ +++P T +VI V++ +DV+ A AA +A+ W R + +R++ ++R A ++ R +EI+A+ ++ GKP++++ + Y + G H + ++PIG I PWNFP + A Sbjct: 39 LVINGE--EKFTKDTYQSINPANTTEVIAEVSKATQKDVDDAFEAANEAYKS--WKRWSHKDRAEFLIRVAAIIRRRKEEISAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNKYFYKPIGTGVTIPPWNFPFAIMA 189 The following BLAST results are available for this feature:
BLAST of FC930053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930053 ID=FC930053; Name=FC930053; organism=Citrus clementina; type=EST; length=720bpback to top |