FC930065

Overview
NameFC930065
Unique NameFC930065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  238 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            V   QL I+G++V++ SGKTF +++P  G++I  + +   +D+  AV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG A  IQG   P        T  EP+GV   I  WN+
Sbjct:    4 VQVHQLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  238 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            V   QL I+G++V++ SGKTF +++P  G++I  + +   +D+  AV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG A  IQG   P        T  EP+GV   I  WN+
Sbjct:    4 VQVHQLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  238 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            V   QL I+G++V++ SGKTF +++P  G++I  + +   +D+  AV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG A  IQG   P        T  EP+GV   I  WN+
Sbjct:    4 VQVHQLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  238 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            V   QL I+G++V++ SGKTF +++P  G++I  + +   +D+  AV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG A  IQG   P        T  EP+GV   I  WN+
Sbjct:    4 VQVHQLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I G++V  A G+ +  L P TG ++  VA     D++ A+ AA K  D+  W   +  +R+ I+ + AD +E++ + +A  ETWDNGKP  +++  +VP+    FRY+A      +G  +  D        HEP+GV GQIIPWNF
Sbjct:   29 IGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDK--WAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNF 172          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23
Identity = 59/154 (38.31%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  235 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            + D  +L I+G + D+ S  TF  ++P  G+V+  V     EDV RAV +A K   +  W   TA ERS+I+ R  D+L   NDE+AALET D GK F ++   +V     +  YYAG    I+G   P      V T  EP+GV   I  WN+
Sbjct:    3 RFDLQKLYIDGGYSDAGSDATFEAINPANGEVLAQVQRATKEDVERAVVSAEKG--QKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETQYVDVVTGADVLEYYAGLVPAIEGEQIPLRDTSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23
Identity = 57/149 (38.26%), Postives = 90/149 (60.40%), Query Frame = 1
Query:  253 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNF 696
            L I+G+++ +   +    ++P   + I  V+EG  ED  +A++AAR+AFD+G W   +  ER KI+L+ A+L+ R  +E+A LE+ D GK  E+S + ++     +F+YYAG ADK  G    +  P    + + EPIGV GQI PWN+
Sbjct:    5 LFIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEES-KADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNY 152          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23
Identity = 56/149 (37.58%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G    + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T HEP+GV   I  WN+
Sbjct:    8 QLYIHGGCTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRHEPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22
Identity = 56/154 (36.36%), Postives = 84/154 (54.55%), Query Frame = 1
Query:  235 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            + +  +L I+G +VD+++ +TF +++P  G+V+  +     EDV RAV AA K   +  W   TA ERS+I+ R  D+L   NDE+AALET D GK   ++   ++     +  YYAG    I+G   P      V T  EP+GV   I  WN+
Sbjct:    3 RFELQKLYIDGGYVDASNTETFDSINPANGEVLAKIQRASKEDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22
Identity = 61/162 (37.65%), Postives = 86/162 (53.09%), Query Frame = 1
Query:  220 ITPPVKVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            IT P  + Y Q   L IN +F+ +  GKT+P  DP T + +  V+    EDV  A+  A +AF +  W  +   ER +++ + AD LE   D ++++E  DNGK     A+ +V +     R  A +ADK+ G T      Y   T  EPIGV GQIIPWNF
Sbjct:   14 ITLPNGLTYEQPTGLFINNKFMKAQDGKTYPVEDPSTENTVCEVSSATTEDVEYAIECADRAFHDTEWATQDPRERGRLLSKLADELESQIDLVSSIEALDNGKTL-ALARGDVTIAINCLRDAAAYADKVNGRTINTGDGYMNFTTLEPIGVCGQIIPWNF 174          
The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 295
Match NameE-valueIdentityDescription
BETB_ACIBS4.282e-2335.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC4.282e-2335.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB54.282e-2335.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB34.282e-2335.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
ALDB_ECOLI4.282e-2336.30Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
BETB_PSEFS5.592e-2338.31Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_BACSU7.304e-2338.26Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
BETB_ECO7I9.539e-2337.58Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_PSESM1.246e-2236.36Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
ALDH6_YEAST1.246e-2237.65Magnesium-activated aldehyde dehydrogenase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionC34003D08EF PostHarvC1 Citrus clementina cDNA clone C34003D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bp
CACAAGAGAGGAGGAGAGGAAAAAAAAAAAAAGATAAAAATTAAAGTTGT
GATGGCTGCAAGAAGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTT
CTTCACCTACTCTGTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCT
GCTGCTGCTGCTGCCGCCTCCTGCGGATACAGCACGGTTTCTTCTGCTGC
TGCTGCTGCTGAAGATCCAATTACTCCGCCTGTTAAAGTTGATTATACTC
AGCTTCTAATTAATGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTT
CCCACATTAGACCCCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGG
TGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTG
ATGAAGGACCGTGGCCTAGGAAGACTGCTTATGAAAGGTCAAAAATAATT
TTGCGCTTCGCTGATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCT
TGAGACTTGGGATAACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAG
TACCAATGACCACGCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAG
ATTCAGGGTCTCACTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTT
GCACGAACCAATTGGTGTAGCAGGTCAAATTATCCCATGGAACTTTCC
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