FC930065

Overview
NameFC930065
Unique NameFC930065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 1
Query:  235 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            + +  +L I+G +VD+++ +TF  ++P  G+V+  +     EDV RAV AA K   +  W   TA ERS+I+ R  D+L   NDE+AALET D GK   ++   ++     +  YYAG    I+G   P      V T  EP+GV   I  WN+
Sbjct:    3 RFELQKLYIDGGYVDASNTETFDAINPANGEVLAQIQRAGKEDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOL6 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6 GN=betB PE=3 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECO55 (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECO45 (Betaine aldehyde dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG+TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22
Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +  + SG TF T++P  G+V+  V     EDV+RAV +A++   +  W   TA ERS+I+ R  D+L   NDE+A LET D GK + +++  ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGGYTSATSGHTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNY 154          
The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 295
Match NameE-valueIdentityDescription
BETB_PSE142.125e-2236.36Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_ECOSM2.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI2.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLC2.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL62.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS2.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH2.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO552.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO452.125e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL53.625e-2236.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC34003D08EF PostHarvC1 Citrus clementina cDNA clone C34003D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bp
CACAAGAGAGGAGGAGAGGAAAAAAAAAAAAAGATAAAAATTAAAGTTGT
GATGGCTGCAAGAAGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTT
CTTCACCTACTCTGTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCT
GCTGCTGCTGCTGCCGCCTCCTGCGGATACAGCACGGTTTCTTCTGCTGC
TGCTGCTGCTGAAGATCCAATTACTCCGCCTGTTAAAGTTGATTATACTC
AGCTTCTAATTAATGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTT
CCCACATTAGACCCCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGG
TGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTG
ATGAAGGACCGTGGCCTAGGAAGACTGCTTATGAAAGGTCAAAAATAATT
TTGCGCTTCGCTGATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCT
TGAGACTTGGGATAACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAG
TACCAATGACCACGCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAG
ATTCAGGGTCTCACTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTT
GCACGAACCAATTGGTGTAGCAGGTCAAATTATCCCATGGAACTTTCC
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