FC930101

Overview
NameFC930101
Unique NameFC930101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:33..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.579e-15
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 3
Query:  306 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 587
            EL++ TENF +N ++G+G  G VY G+L  G   A+KK     +   EEF+ +V ++S++ H N V+LLG C++    VL YEF  NG+L + LH
Sbjct:  439 ELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLH 533          

HSP 2 Score: 20.4014 bits (41), Expect = 6.579e-15
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  700 SSYYHRDIKSS 732
            S  YHRD+KS+
Sbjct:  567 SPIYHRDVKST 577          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.531e-15
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  306 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG 599
            E+ ++T+NF    ++G+G +G VY+G +K     A+K L  +S Q  +EF A+V ++ R+ H N V L+GYC +G    L YEF  NG L   L G+ G
Sbjct:  558 EVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGG 654          

HSP 2 Score: 23.8682 bits (50), Expect = 8.531e-15
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  650 IAVGAAKGLEYLHEKADPHII 712
            IA+ AA GLEYLH    P ++
Sbjct:  666 IALEAALGLEYLHIGCTPPMV 686          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.586e-15
Identity = 49/159 (30.82%), Postives = 77/159 (48.43%), Query Frame = 3
Query:  165 KAADNGNAYMVKSSAGT--DGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            +A DNGN Y V ++A     G   ASE       A K       A  V +L+++     +  ++G+G++G  Y  +L +    A+K+L      D+EF  ++ +V  + HEN V L  Y      ++L Y+F   GSL  +LHG +G  G  P   L+W
Sbjct:  319 EAVDNGNVYSVSAAAAAAMTGNGKASEG---NGPATKKLVFFGNATKVFDLEDLLR--ASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMADKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGA-GRSP---LNW 468          

HSP 2 Score: 28.8758 bits (63), Expect = 8.586e-15
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  644 SEIAVGAAKGLEYLHEK 694
            S IA+GAA+GL+YLH +
Sbjct:  472 SRIAIGAARGLDYLHSQ 488          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.056e-14
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query:  297 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 587
            ++  L++ T NF    +IGEGS G VY   L+ G   A+KKL  +    Q D EFL  VS V +LK  + ++LLGYC +   R+L YE+  NGSL D LH
Sbjct:  486 TIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALH 585          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.106e-14
Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  234 SEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 590
            S    +G   + +  +++   + D++  +TEN     +IG G+   VY   LKS    AIK+L  ++ P    EF  ++  +  ++H N V L GY +  T  +L Y++  NGSL D+LHG
Sbjct:  616 SSKQAEGLTKLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRL-YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHG 735          

HSP 2 Score: 31.9574 bits (71), Expect = 1.106e-14
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  638 TASEIAVGAAKGLEYLHEKADPHII 712
            T  +IAVGAA+GL YLH    P II
Sbjct:  746 TRLKIAVGAAQGLAYLHHDCTPRII 770          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.117e-14
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 3
Query:  309 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 584
            LK+ T NF  +  +G G YG V+ G L  G   AIK+L  S K+P +E   ++ ++SR +H+N V+LLG C    +  + YEF +N SL  IL
Sbjct:  324 LKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHIL 416          

HSP 2 Score: 25.409 bits (54), Expect = 1.117e-14
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  650 IAVGAAKGLEYLHE 691
            I +G A+GLEYLHE
Sbjct:  433 IILGTAEGLEYLHE 446          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.449e-14
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 3
Query:  321 TENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 572
            T+ F +   +G+G +G VY G L +G   A+K+L   S Q D EF  +VS+++RL+H N V+LLG+C +G  ++L YEF  N SL
Sbjct:  350 TDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSL 434          

HSP 2 Score: 22.7126 bits (47), Expect = 1.449e-14
Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 2
Query:  650 IAVGAAKGLEYLHEKADPHII 712
            I  G A+GL YLHE +   II
Sbjct:  455 IIEGIARGLLYLHEDSQLKII 475          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.868e-14
Identity = 44/149 (29.53%), Postives = 74/149 (49.66%), Query Frame = 3
Query:  165 KAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTS-RVLAYEFASNGSLHDILHGRKGVKG 608
            +AA  GN    K +        AS+  PKGAQ   +  +   A S ++L + TE F    LI  G  G ++ G L++G    IKK+D  +   E +++++ + S+  H+  V  LG+C++  S + L Y+F  +G L   L  +   +G
Sbjct:  479 RAAQRGNNDRPKPAG------EASQQPPKGAQTFDLSRLG-NAFSYEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKSEGYISELELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEG 620          

HSP 2 Score: 30.4166 bits (67), Expect = 1.868e-14
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  638 TASEIAVGAAKGLEYLHEKADPHII 712
            T  +IA+GAA+GL YLH +  P ++
Sbjct:  630 TRLKIALGAAEGLSYLHHECSPPLV 654          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.870e-14
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  306 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            E++ +T+NF    ++GEG +G VY+GIL      A+K L  S  Q  +EF A+V ++ R+ H N V L+GYC + ++  L YE+A NG L   L G +G      G  L W
Sbjct:  567 EVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERG------GSPLKW 669          

HSP 2 Score: 24.2534 bits (51), Expect = 1.870e-14
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +I V  A+GLEYLH    P ++
Sbjct:  674 KIVVETAQGLEYLHTGCKPPMV 695          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.873e-14
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  297 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG 599
            S  EL + T  F     +G G  G VY G+L+     A+KKL+  +Q  E F A++S++ R+ H N V++ G+C +G+ R+L  E+  NGSL +IL    G
Sbjct:  525 SYRELVKATRKFKVE--LGRGESGTVYKGVLEDDRHVAVKKLENVRQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGG 623          

HSP 2 Score: 25.7942 bits (55), Expect = 1.873e-14
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  650 IAVGAAKGLEYLHEKADPHIIIAILSP 730
            IA+G AKGL YLH +    +I   + P
Sbjct:  635 IALGVAKGLAYLHHECLEWVIHCDVKP 661          
The following BLAST results are available for this feature:
BLAST of FC930101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
WAKLH_ARATH6.579e-1542.11Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
RLK7_ARATH8.531e-1539.39Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y1848_ARATH8.586e-1530.82Probable inactive receptor kinase At1g48480 OS=Ara... [more]
SUB_ARATH1.056e-1444.00Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
ERL1_ARATH1.106e-1431.40LRR receptor-like serine/threonine-protein kinase ... [more]
CRK43_ARATH1.117e-1440.86Putative cysteine-rich receptor-like protein kinas... [more]
CRK39_ARATH1.449e-1443.53Putative cysteine-rich receptor-like protein kinas... [more]
Y2165_ARATH1.868e-1429.53Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.870e-1438.74Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE1.873e-1437.62Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionC34003G09EF PostHarvC1 Citrus clementina cDNA clone C34003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930101 ID=FC930101; Name=FC930101; organism=Citrus clementina; type=EST; length=740bp
GATCGTCGTCTTATCCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATT
CAAAATATCCAGCTCGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAG
AGGGGCATTATTGTGGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAG
AAGATGATATGCATAAAGCTGCTGACAATGGCAATGCATACATGGTTAAA
AGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCACCTAA
GGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAG
TGGATGAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTGATT
GGAGAAGGTTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTGGACA
TGCTGCAGCAATAAAAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGT
TTTTAGCACAGGTTTCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTT
CAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGA
GTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAAGGTG
TAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAA
TTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAGAAGGCAGAT
CCTCATATTATCATCGCGATATTAAGTCCAGCATGTACTA
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