FC930102

Overview
NameFC930102
Unique NameFC930102
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930102_ssr46 microsatellite FC930102_ssr46:46..67. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15102 contig Ccv1_Contig15102:1..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.742e-44
Identity = 96/209 (45.93%), Postives = 129/209 (61.72%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNLXALFAPHLL 722
            V VTGG GFI SWL+MRLL+ GY+V  TVR   DPE  N K +  L  LP A   L ++ ADL+    FD AI GC GV HVATP+DFE K+PE  + +  + G L I++SC K+ TVKR+V+TSS   +   +      DET WSD+D+I      G  Y +SK L  +AA+E A ++ +D +++IP +VVGPFI     + F P L+
Sbjct:   20 VWVTGGAGFIGSWLVMRLLERGYNVHATVR---DPE--NQKKVKHLLELPKADTNLTLWKADLAVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEDQKLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFI----TSTFPPSLI 219          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.031e-43
Identity = 90/198 (45.45%), Postives = 128/198 (64.65%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFI 683
            VCVTG  GFI SWL+MRLL+ GY V  TVR   D      K +  L  LP A   L+++ ADL+    FD AI GC GV H+ATP+DFE K+PE  I +  I G L I++SC+K+ TVK++V+TSS   V   +K + + DE+ WSD+D+I  +K+ +W   Y +SKTL  +AA +  + + +  +++IP++VVGPFI
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGD-----LKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFI 199          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 88/209 (42.11%), Postives = 127/209 (60.77%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPFICPNLXALFAPHLL 722
            VCVTG  GFI SWL+MRLL+ GY+V  TVR   DP   N K +  L  LP A   L ++ AD++    FD AI GC GV H+AT ++F+  +PE  + +  I+G L I+KSC+++ TVK+ ++T+S   V   +    + DET  SD+D+I      G  Y +SK L  +A +E A+E+ +D +++IP +VVGPFI P     F P L+
Sbjct:   20 VCVTGAAGFIGSWLVMRLLERGYTVRATVR---DPG--NMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEHQKPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPT----FPPSLI 219          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.318e-38
Identity = 87/194 (44.85%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   99 CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVG 674
            CV GGTG +AS LI  LL  GY V TTVR   DPE  N K ++ L+ L    + L+IF ADL+  D F+++ +GC  + HVATP++F+ ++PE+ + + AI G + +LKSCLKS +VKRV+YTSS AAV  N+      +M+E  W+DV+++ +   +   Y ISK L  + A EFA+E+ ++LVT+IP+++ G
Sbjct:   14 CVIGGTGNLASILIKHLLQSGYKVNTTVR---DPE--NEKKIAHLRKLQELGD-LKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: ALD2_SPOSA (Aldehyde reductase 2 OS=Sporobolomyces salmonicolor PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 67/210 (31.90%), Postives = 103/210 (49.05%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS--------YAISKTLTXRAALEFAEEH--GLDLVTLIPSMVVGPFICP 689
            V VTG  GF+AS ++ +LL+HGY V  T RS     +   +   +    PG  E   +   D+     +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++   + +VKR V TSS  +      +V+   +DE  W +++ I K  +  +S        YA SKT    AA +F +E+     L  ++P+  +G    P
Sbjct:   15 VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVV--EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP 216          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: YKJ7_SCHPO (Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe GN=SPAC513.07 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 67/210 (31.90%), Postives = 103/210 (49.05%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR-IFHADLSHPDGFDAAIAGCTGVLHVATPVDFED-KEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVF------YNDKDVDMMDETFWSDVDYIRKL--DSWGKSYAISKTLTXRAALEFAEEH--GLDLVTLIPSMVVGPFICP 689
            V VTG TGFI + +  +LL  GY V  TVRS         K    ++  PG  +++  +   D+S  + FD  +     + H+A+P   E+  + +  +   A+ GTLGIL++     ++KR+V TSS AAV       +N+K   +  E  W+ + Y   L  D+   +Y  SK L   AA E+ +E     D+ T+ P  V GP I P
Sbjct:    6 VLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSM-------EKADELIRLNPGLKDKIEFVIVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPHNNK---VYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHP 205          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 64/207 (30.92%), Postives = 95/207 (45.89%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI----AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK--SGTVKRVVYTSSNAAVFYNDKDVD---MMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEH----GLDLVTLIPSMVVGP 677
            V V+G +GFIA  ++ +LL   Y V  TVRS       + K+   L+              D+SHP+ FD  +         VLH A+P  ++  E E+ +   A+ GT  IL S  K  + TV+RVV TSS  A+    K  D   +  E  W++  +         +Y  SK    +AA EF +E+       L T+ PS++ GP
Sbjct:    5 VLVSGASGFIALHILSQLLKQDYKVIGTVRS-------HEKEAKLLRQFQHNPNLTLEIVPDISHPNAFDKVLQKRGREIRYVLHTASPFHYDTTEYEKDLLIPALEGTKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGP 204          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: DFRA_SYNY3 (Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803) GN=dfrA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 61/193 (31.61%), Postives = 93/193 (48.19%), Query Frame = 3
Query:  102 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEHGLDLVTLIPSMVVGPF 680
            VTGGTGF+ + L+  LL+ GY V   VR+   P++        L+NLP     +     DL+  D     + GC G+ HVA       K+  E + +  + GT  IL +C +   ++R VYTSS AA+     D    DE++ S V+ +       K +A  + LT       A + G D+V + PS  +GP+
Sbjct:   15 VTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDN--------LQNLP-----IDWVVGDLNDGD-LHQQMQGCQGLFHVAAHYSLWQKD-REALYRSNVLGTRNIL-ACAQKAGIERTVYTSSVAAIGVKG-DGQRADESYQSPVEKLIGAYKQSKYWAEQEALT-------AAQQGQDIVIVNPSTPIGPW 183          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: GRE2_YEAST (NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae GN=GRE2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 67/208 (32.21%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK--SGTVKRVVYTSSNAAVF----YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTXRAALEFAEEH----GLDLVTLIPSMVVGP 677
            V V+G  GFIA  ++  LL   Y V  + RS+   E+      +F  N   + E +     D+S  D FD            VLH A+P  F+  + E  +   A+NG  GIL S  K  + +V+RVV TSS AAVF     NDK +   +E+ W+   +         +Y  SK    +AA EF EE+      +L  + P  V GP
Sbjct:    3 VFVSGANGFIAQHIVDLLLKEDYKVIGSARSQEKAENLTE---AFGNNPKFSMEVV----PDISKLDAFDHVFQKHGKDIKIVLHTASPFCFDITDSERDLLIPAVNGVKGILHSIKKYAADSVERVVLTSSYAAVFDMAKENDKSLTFNEES-WNPATWESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGP 202          
BLAST of FC930102 vs. ExPASy Swiss-Prot
Match: YGD9_YEAST (Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae GN=YGL039W PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 67/211 (31.75%), Postives = 99/211 (46.92%), Query Frame = 3
Query:   96 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG----CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSC--LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-------KSYAISKTLTXRAALEFAEEH----GLDLVTLIPSMVVGP 677
            V V+G TGFIA  ++  LL  GY V  + RS+     +N   L   K+ P  S  +     D++ P+ FD            VLH+A+PV F   + E+ +   A+NGT  IL++     + TV++VV TSS AA+       DM D +F  + +   K D+W         +Y  SK    + A +F EE+       L T+ P  V GP
Sbjct:    8 VFVSGATGFIALHVVDDLLKTGYKVIGSGRSQ----EKNDGLLKKFKSNPNLSMEIV---EDIAAPNAFDKVFQKHGKEIKVVLHIASPVHFNTTDFEKDLLIPAVNGTKSILEAIKNYAADTVEKVVITSSVAAL---ASPGDMKDTSFVVNEESWNK-DTWESCQANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTINPGFVFGP 207          
The following BLAST results are available for this feature:
BLAST of FC930102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
DFRA_SOLLC2.742e-4445.93Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_GERHY3.031e-4345.45Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_ANTMA1.078e-4042.11Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
BAN_ARATH1.318e-3844.85Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
ALD2_SPOSA3.492e-1531.90Aldehyde reductase 2 OS=Sporobolomyces salmonicolo... [more]
YKJ7_SCHPO1.327e-1431.90Putative uncharacterized oxidoreductase C513.07 OS... [more]
YD541_YEAST4.269e-1330.92Putative uncharacterized oxidoreductase YDR541C OS... [more]
DFRA_SYNY34.269e-1331.61Putative dihydroflavonol-4-reductase OS=Synechocys... [more]
GRE2_YEAST3.996e-1132.21NADPH-dependent methylglyoxal reductase GRE2 OS=Sa... [more]
YGD9_YEAST6.816e-1131.75Putative uncharacterized oxidoreductase YGL039W OS... [more]

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Properties
Property NameValue
Genbank descriptionC34003G10EF PostHarvC1 Citrus clementina cDNA clone C34003G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930102 ID=FC930102; Name=FC930102; organism=Citrus clementina; type=EST; length=725bp
GAAAAGTGACTGATACAGTTCATATAGAGAAGGAGCTAGACACACAGAGA
GAGAGAGAGAGAGAGAGGAAAAATATGGAAGAGGGTAAAGGAAGAGTCTG
TGTAACAGGTGGTACAGGTTTCATAGCATCTTGGCTGATCATGAGACTTC
TTGACCATGGTTACTCCGTTACAACCACCGTTCGGTCCGAGCTGGACCCA
GAACACAGGAATTCGAAAGACCTTAGCTTCCTGAAAAATCTACCGGGAGC
ATCTGAGAGGCTCCGTATCTTTCATGCCGATCTCAGCCACCCAGATGGCT
TCGATGCAGCTATTGCTGGGTGCACTGGGGTTCTTCATGTTGCCACGCCC
GTTGATTTTGAAGACAAAGAACCTGAGGAAGTTATAACACAAAGAGCAAT
TAATGGAACACTAGGCATCTTAAAATCATGCTTGAAGTCTGGAACGGTGA
AGCGAGTTGTGTACACTTCAAGTAACGCGGCTGTGTTTTACAATGACAAA
GATGTTGATATGATGGATGAGACATTTTGGAGTGATGTTGATTACATCAG
AAAATTGGATTCCTGGGGAAAATCGTACGCAATTTCTAAGACATTAACGG
ANAGGGCAGCTCTTGAGTTTGCAGAAGAACATGGATTAGATCTAGTGACA
CTGATACCTTCTATGGTTGTTGGTCCCTTCATTTGTCCTAATTTGCANGC
TCTGTTCGCTCCTCACTTGCTTTGA
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