FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_FLAJ1 (Enolase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=eno PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.179e-53
Identity = 113/198 (57.07%), Postives = 135/198 (68.18%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V ARQI DSRGNPT+EVDV T +G + RAAVPSGASTG +EA+ELRDGG  YLGKGV  AV+NVN +I   L G    EQ  ID  M+  LDGT N     K KLGANAIL VSLA  KA A+   +PLY+++  +S N    LPVP  N+INGGSH+   +A QEFMI PV A+ F  AM+MG E++H LK V+
Sbjct:    4 IIKVHARQILDSRGNPTIEVDVVTENGVLGRAAVPSGASTGEHEAVELRDGGKAYLGKGVLNAVNNVNTVIAEELVGTSVFEQNTIDQLMI-DLDGTPN-----KSKLGANAILGVSLAAAKAAANELGLPLYRYVGGVSAN---TLPVPMMNIINGGSHSDAPIAFQEFMIFPVKATSFTHAMQMGTEIFHSLKKVL 192          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO1_PSESM (Enolase 1 OS=Pseudomonas syringae pv. tomato GN=eno1 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.179e-53
Identity = 112/201 (55.72%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S Y+GKGV KAV+N+N  I   L GKDP +Q A+D+ M+  LD T N     K  LGANAILAVSLA  KA A  + +PLY HIA L+G   +  +PVP  N+INGG HA N + +QEFMI PVGA  F EA++ G E++HHLKAV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYMGKGVLKAVANINGPIRDLLLGKDPVDQKALDHAMIA-LDATEN-----KASLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGVYSMPVPMMNIINGGEHADNNIDIQEFMIQPVGAKSFAEALRWGTEIFHHLKAVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DESAD (Enolase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=eno PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.199e-52
Identity = 111/200 (55.50%), Postives = 142/200 (71.00%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TITAV AR+I DSRGNPTVEV+V    G   RAAVPSGASTG  EALELRDG  D Y GKGV  AV+NV   I  AL G+D   Q  IDN ++ +LDGT N     K++LGANA+L VS+A+ +AGA++  IPLY+++  ++G    +LPVP  N+INGG HA N L +QEFMI+P+GA  F EA++MG E++H LK ++
Sbjct:    3 TITAVWAREILDSRGNPTVEVEVVLESGATGRAAVPSGASTGTREALELRDGDKDRYKGKGVQVAVANVREEIAEALVGQDALRQVNIDNILI-ELDGTEN-----KERLGANAMLGVSMAVARAGANLLGIPLYQYLGGVNGK---LLPVPLMNIINGGEHAPNNLDIQEFMIMPIGAETFAEALRMGAEIFHTLKGLL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACV8 (Enolase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=eno PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.199e-52
Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  +K R+I DSRGNPTVEVDV    G + RA+VPSGASTG +EALELRDG    Y GKGV KAV N+N +I PAL G D  +Q  ID  M+  LDGT       K KLGANAIL VSLA+ KA A+   IPLY++I    G    V+PVP  N+INGGSH+   +A QEFMI PVGA  F+EA++MG EV+H LK V+K+
Sbjct:    3 IAEIKGREILDSRGNPTVEVDVILESGIMGRASVPSGASTGEHEALELRDGDKTRYGGKGVLKAVENINTLIAPALKGMDSMDQRGIDKAMLD-LDGTPT-----KSKLGANAILGVSLAVAKAAANYLDIPLYRYIG---GTNTYVMPVPMMNIINGGSHSDAPIAFQEFMIRPVGAKTFREALRMGAEVFHALKEVLKK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PSYIN (Enolase OS=Psychromonas ingrahamii (strain 37) GN=eno PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.566e-52
Identity = 115/202 (56.93%), Postives = 138/202 (68.32%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            TI  V  R+I DSRGNPTVE +V  +DG +  AA PSGASTG  EALELRDG  + YLGKGV KAV+ VN  I  AL GKD  +Q  +D  M+  LDGT N     K K GANAILAVSLA  KA A  KK+PLY HIA+L+G   +  +P+P  N+INGG HA N + +QEFMI PVGAS F+E ++MG EV+H L  V+K
Sbjct:    3 TIVKVLGREIMDSRGNPTVEAEVHLADGSIGMAAAPSGASTGSREALELRDGDKARYLGKGVLKAVTAVNGPIAEALIGKDAVKQAELDQIMID-LDGTEN-----KAKFGANAILAVSLAAAKAAAVSKKVPLYAHIADLNGTPGVYSMPLPMMNIINGGEHADNSVDIQEFMIQPVGASTFREGLRMGAEVFHSLAKVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_IDILO (Enolase OS=Idiomarina loihiensis GN=eno PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.566e-52
Identity = 114/202 (56.44%), Postives = 139/202 (68.81%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V  R+I DSRGNPTVE DV    GH+ RAA PSGASTG  EALELRDG  S YLGKGV  AV+N+N  I  AL+G D   Q A+DN M+ +LDGT N     K+KLGANAILAVSLA+ KA A  K I LY+HIA L+       +P+P  N++NGG HA N + +QEFMI PVGA  F+E ++MG EV+H LK V+++
Sbjct:    4 IVKVVGREIMDSRGNPTVEADVYLESGHMGRAAAPSGASTGSREALELRDGDTSRYLGKGVETAVANINGAIAEALSGIDAINQEAVDNIML-RLDGTDN-----KEKLGANAILAVSLAVAKAAALSKGIELYEHIANLNNTSGKYSMPLPMMNILNGGEHADNNVDIQEFMIQPVGAESFKEGLRMGAEVFHALKKVLQK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_EMENI (Enolase OS=Emericella nidulans GN=enoA PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.566e-52
Identity = 120/204 (58.82%), Postives = 144/204 (70.59%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I+ + AR ++DSRGNPTVEVDV T  G + RA VPSGASTG +EA ELRDG  S +LGKGV  AV NVN  IGPA+  +  D  EQ+ ID ++  +LDGT N     K  LGANAIL VSLAI KAGA  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA QEFMI+P  AS F E ++ G EVYH LKA+ K+
Sbjct:    3 ISKIHARSVYDSRGNPTVEVDVVTETG-LHRAIVPSGASTGQHEAHELRDGDKSKWLGKGVLTAVKNVNETIGPAVIKENLDVKEQSKIDEFL-NKLDGTPN-----KSNLGANAILGVSLAIAKAGAAEKGVPLYAHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLAFQEFMIVPDTASSFSEGLRQGAEVYHKLKALAKK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DEHSB (Enolase OS=Dehalococcoides sp. (strain BAV1) GN=eno PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.566e-52
Identity = 109/204 (53.43%), Postives = 143/204 (70.10%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            M+  + ++KAR+I DSRGNPTVE DV  SDG   RAAVPSGASTG +EA+ELRDG  S Y G GV KAV+NVN  I  A++G   ++Q  +DN +++ LDGT N     K KLGANA+LA SLA+  A A  + +PLY++   L+ ++  +LPVP FN++NGG HA N    QEFM++PVGA  F +A++MG EVYH LK V+K
Sbjct:    1 MSAVVKSIKAREILDSRGNPTVEADVVLSDGSFGRAAVPSGASTGSHEAVELRDGDKSRYNGLGVHKAVANVNTTIASAISGFKASDQQRLDNLLIE-LDGTPN-----KAKLGANAMLATSLAVAHAAAASRHMPLYRY---LNNSEEYILPVPMFNILNGGKHASNSTDFQEFMVMPVGAKSFAQALQMGTEVYHSLKKVLK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_LEPBL (Enolase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=eno PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 115/200 (57.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  ++AR+I DSRGNPTVEVDVT  DG   RAAVPSGASTG YEA+ELRDG    YLGKGV KAV +VN  I   L G+D  +Q  +D  M+   DGT N     K KLGANAIL  SLA+ KA A   K+PLY++I    GN    LPVP  N+INGG+HA N +  QEFMILPVGA  F+E ++MG EV+H LK+V+K
Sbjct:    7 IQKIQAREIIDSRGNPTVEVDVTLMDGSFGRAAVPSGASTGEYEAVELRDGDKQRYLGKGVLKAVEHVNVKIQEILKGQDALDQNRVDQLML-DADGTKN-----KGKLGANAILGTSLAVAKAAAFHSKLPLYRYI---GGNFARELPVPMMNIINGGAHADNNVDFQEFMILPVGAKNFREGLRMGAEVFHSLKSVLK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_LEPBJ (Enolase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=eno PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 115/200 (57.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  ++AR+I DSRGNPTVEVDVT  DG   RAAVPSGASTG YEA+ELRDG    YLGKGV KAV +VN  I   L G+D  +Q  +D  M+   DGT N     K KLGANAIL  SLA+ KA A   K+PLY++I    GN    LPVP  N+INGG+HA N +  QEFMILPVGA  F+E ++MG EV+H LK+V+K
Sbjct:    7 IQKIQAREIIDSRGNPTVEVDVTLMDGSFGRAAVPSGASTGEYEAVELRDGDKQRYLGKGVLKAVEHVNVKIQEILKGQDALDQNRVDQLML-DADGTKN-----KGKLGANAILGTSLAVAKAAAFHSKLPLYRYI---GGNFARELPVPMMNIINGGAHADNNVDFQEFMILPVGAKNFREGLRMGAEVFHSLKSVLK 197          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_FLAJ19.179e-5357.07Enolase OS=Flavobacterium johnsoniae (strain ATCC ... [more]
ENO1_PSESM9.179e-5355.72Enolase 1 OS=Pseudomonas syringae pv. tomato GN=en... [more]
ENO_DESAD1.199e-5255.50Enolase OS=Desulfovibrio salexigens (strain ATCC 1... [more]
ENO_BACV81.199e-5256.72Enolase OS=Bacteroides vulgatus (strain ATCC 8482 ... [more]
ENO_PSYIN1.566e-5256.93Enolase OS=Psychromonas ingrahamii (strain 37) GN=... [more]
ENO_IDILO1.566e-5256.44Enolase OS=Idiomarina loihiensis GN=eno PE=3 SV=1[more]
ENO_EMENI1.566e-5258.82Enolase OS=Emericella nidulans GN=enoA PE=1 SV=1[more]
ENO_DEHSB1.566e-5253.43Enolase OS=Dehalococcoides sp. (strain BAV1) GN=en... [more]
ENO_LEPBL2.045e-5257.50Enolase OS=Leptospira borgpetersenii serovar Hardj... [more]
ENO_LEPBJ2.045e-5257.50Enolase OS=Leptospira borgpetersenii serovar Hardj... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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