FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DEHSC (Enolase OS=Dehalococcoides sp. (strain CBDB1) GN=eno PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 109/204 (53.43%), Postives = 143/204 (70.10%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            M+  + ++KAR+I DSRGNPTVE DV  SDG   RAAVPSGASTG +EA+ELRDG  S Y G GV KAV+NVN  I  A++G   ++Q  +DN +++ LDGT N     K KLGANA+LA SLA+  A A  + +PLY++   L+ ++  +LPVP FN++NGG HA N    QEFM++PVGA  F +A++MG EVYH LK V+K
Sbjct:    1 MSAEVKSIKAREILDSRGNPTVEADVVLSDGSFGRAAVPSGASTGSHEAVELRDGDKSRYNGLGVHKAVANVNTSIASAISGFKASDQQGLDNLLIE-LDGTPN-----KAKLGANAMLATSLAVAHAAAASRHMPLYRY---LNNSEEYILPVPMFNILNGGKHASNSTDFQEFMVMPVGAKSFAQALQMGTEVYHSLKKVLK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACSU (Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 113/199 (56.78%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  +++ LDGT N     K KLGANAIL VS+A  +A A   +IPLY++   L G  +  LPVP  N++NGG HA N + +QEFMI+PVGA  F+EA++MG +++H LK+V+
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTETGAFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQNAIDQLLIE-LDGTEN-----KGKLGANAILGVSMACARAAADFLQIPLYQY---LGGFNSKTLPVPMMNIVNGGEHADNNVDIQEFMIMPVGAPNFREALRMGAQIFHSLKSVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACA2 (Enolase OS=Bacillus amyloliquefaciens (strain FZB42) GN=eno PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52
Identity = 113/199 (56.78%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  +++ LDGT N     K KLGANAIL VS+A  +A A   +IPLY++   L G  +  LPVP  N++NGG HA N + +QEFMI+PVGA  F+EA++MG +++H LK+V+
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTETGAFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIISPELLGFDVTEQNAIDQLLIE-LDGTEN-----KGKLGANAILGVSMACARAAADFLQIPLYQY---LGGFNSKTLPVPMMNIVNGGEHADNNVDIQEFMIMPVGAPNFREALRMGAQIFHSLKSVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_THEAB (Enolase OS=Thermosipho africanus (strain TCF52B) GN=eno PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 114/204 (55.88%), Postives = 141/204 (69.12%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            M I I  V AR++ DSRGNPTVEV+V   DG + RA VPSGASTG +EALELRDG    YLGKGV KAV NVN +I P L G +  +Q  IDN ++ +LDGT N     K KLGANAIL VS+A+ +A A+  ++PLYK+   L G    VLPVP  NVINGG+HA N L +QEFMI+P GA  F+EA++ G E +H LK ++K
Sbjct:    1 MYIEIIDVFAREVLDSRGNPTVEVEVMLEDGSIGRAIVPSGASTGKFEALELRDGDKKRYLGKGVLKAVENVNELIAPKLLGLNAYDQVYIDNVLL-ELDGTEN-----KSKLGANAILGVSMAVARAAANSLQLPLYKY---LGGVNAKVLPVPLMNVINGGAHADNNLDIQEFMIVPAGAPSFREALRYGAETFHALKKILK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ARTS2 (Enolase OS=Arthrobacter sp. (strain FB24) GN=eno PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 115/200 (57.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I A+ AR+I DSRGNPTVEV+V  SDG + RAAVPSGASTG +EA+ELRDG    YLGKGV KAV  V   I PAL G D T+Q +ID  M+  LDGT N     K KLGANAIL VSLA+  A A    +PLYK+   L G    VLPVP  N++NGGSHA + + +QEFMI P+GA  F E ++ GVEVYH+LK+V++
Sbjct:    4 IDAIHAREILDSRGNPTVEVEVLLSDGQIGRAAVPSGASTGEHEAVELRDGDKGRYLGKGVQKAVDAVIDQIAPALTGFDATDQRSIDQAMI-DLDGTPN-----KSKLGANAILGVSLAVANAAAASADLPLYKY---LGGPNAHVLPVPLMNILNGGSHADSDVDIQEFMIAPIGAETFSEGLRWGVEVYHNLKSVLQ 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ARTCA (Enolase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=eno PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 116/200 (58.00%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I A+ AR+I DSRGNPTVEV+V  SDG + RAAVPSGASTG +EA+ELRDG    YLGKGV KAV  V   I PAL G D T+Q +ID  M+  LDGT N     K KLGANAIL VSLA+  A A    +PLYK+   L G    VLPVP  N++NGGSHA + + +QEFMI P+GA  F E ++ GVEVYH+LK+V+K
Sbjct:    4 IDAIHAREILDSRGNPTVEVEVLLSDGQIGRAAVPSGASTGEHEAVELRDGDKGRYLGKGVQKAVDAVIDQIAPALTGFDATDQRSIDQAML-DLDGTPN-----KGKLGANAILGVSLAVANAAAASADLPLYKY---LGGPNAHVLPVPLMNILNGGSHADSDVDIQEFMIAPIGAETFSEGLRWGVEVYHNLKSVLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ARTAT (Enolase OS=Arthrobacter aurescens (strain TC1) GN=eno PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 116/200 (58.00%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I A+ AR+I DSRGNPTVEV+V  SDG + RAAVPSGASTG +EA+ELRDG    YLGKGV KAV  V   I PAL G D T+Q +ID  M+  LDGT N     K KLGANAIL VSLA+  A A    +PLYK+   L G    VLPVP  N++NGGSHA + + +QEFMI P+GA  F E ++ GVEVYH+LKAV++
Sbjct:    4 IDAIHAREILDSRGNPTVEVEVLLSDGQIGRAAVPSGASTGEHEAVELRDGDKGRYLGKGVQKAVDAVIDEISPALIGFDATDQRSIDQAMI-DLDGTPN-----KGKLGANAILGVSLAVANAAAASADLPLYKY---LGGPNAHVLPVPLMNILNGGSHADSDVDIQEFMIAPIGAETFSEGLRWGVEVYHNLKAVLQ 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ALTAL (Enolase OS=Alternaria alternata GN=ENO PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 118/206 (57.28%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            +TIT + AR ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S + GKGV+KAV+NVN  I PAL  +  D  +Q+A+D ++  +LDGT N     K  LGANAIL VS+AI KA A  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA QEFMI+P  A  F EAM+ G EVY  LKA+ K+
Sbjct:    1 MTITKIHARSVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGSHEACELRDGDKSKWGGKGVTKAVANVNDTIAPALIKEKLDVKDQSAVDAFL-NKLDGTTN-----KTNLGANAILGVSMAIAKAAAAEKGVPLYAHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLAFQEFMIVPCEAPTFSEAMRQGAEVYQKLKALAKK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ALKMQ (Enolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=eno PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 109/200 (54.50%), Postives = 141/200 (70.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I+ V AR++ DSRGNPT+EV+V    G + RA VPSGASTG +EA+ELRDG    YLGKGV KAV NVN II P + G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ KA A    IPL++++  ++  +   LPVP  N++NGGSHA N + +QEFM++PVGA  F+EA++MG E+YH+LK V+K
Sbjct:    4 ISDVYAREVLDSRGNPTIEVEVYLESGVLGRAIVPSGASTGAFEAVELRDGDKGRYLGKGVLKAVENVNDIIAPEITGLDALDQVAIDKIMLD-LDGTPN-----KAKLGANAILGVSMAVAKAAAEALDIPLFQYLGGVNAKQ---LPVPMMNILNGGSHADNNVDIQEFMVMPVGAKTFKEALRMGTEIYHNLKDVLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PYRHO (Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.488e-52
Identity = 118/198 (59.60%), Postives = 139/198 (70.20%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            ITA+ AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  ++ +LDGT N     K  LGANAILAVSLA+ KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN+L  QEFMI+P+GAS F+EA++   E YH LK VI
Sbjct:    7 ITAIVAREILDSRGNPTVEVDVHTPIA-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDKLLI-ELDGTEN-----KSNLGANAILAVSLAVAKAAANSLELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNELDFQEFMIMPIGASSFREAIRWVSETYHVLKRVI 194          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_DEHSC2.045e-5253.43Enolase OS=Dehalococcoides sp. (strain CBDB1) GN=e... [more]
ENO_BACSU2.045e-5256.78Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4[more]
ENO_BACA22.045e-5256.78Enolase OS=Bacillus amyloliquefaciens (strain FZB4... [more]
ENO_THEAB2.671e-5255.88Enolase OS=Thermosipho africanus (strain TCF52B) G... [more]
ENO_ARTS22.671e-5257.50Enolase OS=Arthrobacter sp. (strain FB24) GN=eno P... [more]
ENO_ARTCA2.671e-5258.00Enolase OS=Arthrobacter chlorophenolicus (strain A... [more]
ENO_ARTAT2.671e-5258.00Enolase OS=Arthrobacter aurescens (strain TC1) GN=... [more]
ENO_ALTAL2.671e-5257.28Enolase OS=Alternaria alternata GN=ENO PE=1 SV=2[more]
ENO_ALKMQ2.671e-5254.50Enolase OS=Alkaliphilus metalliredigens (strain QY... [more]
ENO_PYRHO3.488e-5259.60Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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