FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MARMS (Enolase OS=Marinomonas sp. (strain MWYL1) GN=eno PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 114/200 (57.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  +KAR++ DSRGNPTVE DV  +DG V  A  PSGASTG  EALELRDG  S YLGKGV KAV+ VN  I  AL GKD   Q  ID+ M+  LDGT N     K   GANAILAVSLA+ KA A  KK+PLY HIA+++G   +  +PVP  N+INGG HA N + +QEFMI PVGA  F+EA++ G E++H LK V+
Sbjct:    4 IVDIKAREVLDSRGNPTVEADVILADGSVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVAAVNGPIRDALIGKDALAQAEIDHIMI-DLDGTEN-----KSTFGANAILAVSLAVAKAAAISKKVPLYAHIADINGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAPNFREALRYGAEIFHALKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BREBN (Enolase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=eno PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 112/199 (56.28%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            IT + AR+I DSRGNPTVEV+V   DG + RA VPSGASTG YEA+ELRDG  S YLGKGV KAV NVN II P L G D  +Q  ID  M+ QLDGT N     K KLGANAIL VS+A+ +A A    +PLY +   L G    +LPVP  N++NGG HA N + +QEFM++PVGA+ F+EA++ G E++H LK V+
Sbjct:    4 ITDIYAREIMDSRGNPTVEVEVYLEDGSMGRADVPSGASTGAYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPELIGMDALDQVGIDMAMI-QLDGTPN-----KGKLGANAILGVSMAVARAAAESLGVPLYNY---LGGFNARMLPVPMMNILNGGKHADNTVDIQEFMVMPVGATSFKEALRTGAEIFHSLKKVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO2_YEAST (Enolase 2 OS=Saccharomyces cerevisiae GN=ENO2 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.555e-52
Identity = 113/207 (54.59%), Postives = 149/207 (71.98%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            + ++ V AR ++DSRGNPTVEV++TT  G V R+ VPSGASTG++EALE+RD   S ++GKGV  AV+NVN +I  A   A  D  +Q A+D++++  LDGT N     K KLGANAIL VS+A  +A A  K +PLY+H+A+LS +K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA  F EAM++G EVYH+LK++ K+
Sbjct:    1 MAVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDEDKSKWMGKGVMNAVNNVNNVIAAAFVKANLDVKDQKAVDDFLLS-LDGTAN-----KSKLGANAILGVSMAAARAAAAEKNVPLYQHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEAMRIGSEVYHNLKSLTKK 200          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_RHIEC (Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=eno PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52
Identity = 111/195 (56.92%), Postives = 134/195 (68.72%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLK 679
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++   S +   +LPVP  N+INGG+HA N +  QEFMILPVGA    EA++MG EV+H L+
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYVGGASAS---LLPVPMMNIINGGAHADNPIDFQEFMILPVGADTIAEAVRMGSEVFHTLR 189          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PHOPR (Enolase OS=Photobacterium profundum GN=eno PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52
Identity = 116/201 (57.71%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KA+  VN  I  AL GKD T+Q AID  M+  LDGT N     K K GANAILAVSLA  KAGA  K +PLY+HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA  F+EA+++G EV+H+L  V+K
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKALEAVNGPIAEALLGKDATDQAAIDQVMID-LDGTEN-----KSKFGANAILAVSLANAKAGAAAKGMPLYEHIAELNGTAGQFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTFREAVRIGAEVFHNLAKVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SHEB9 (Enolase OS=Shewanella baltica (strain OS195) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S YLGKGV  AV+NVN +I  AL GKD T Q  +D  M+  LDGT N     K KLGANAILAVSLA  KA A  K IPLY HIAEL+G      +PVP  N++NGG HA N + +QEFM+ PVGA  F+EA++MG E++H LK V+
Sbjct:    4 IINVIGREIMDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRYLGKGVLTAVANVNDLIRTALLGKDATAQAELDQIMID-LDGTEN-----KDKLGANAILAVSLAAAKAAAAFKGIPLYAHIAELNGTPGQYSMPVPMMNILNGGEHADNNVDIQEFMVQPVGAKTFREALRMGAEIFHTLKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SHEB8 (Enolase OS=Shewanella baltica (strain OS185) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S YLGKGV  AV+NVN +I  AL GKD T Q  +D  M+  LDGT N     K KLGANAILAVSLA  KA A  K IPLY HIAEL+G      +PVP  N++NGG HA N + +QEFM+ PVGA  F+EA++MG E++H LK V+
Sbjct:    4 IINVIGREIMDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRYLGKGVLTAVANVNDLIRTALLGKDATAQAELDQIMID-LDGTEN-----KDKLGANAILAVSLAAAKAAAAFKGIPLYAHIAELNGTPGQYSMPVPMMNILNGGEHADNNVDIQEFMVQPVGAKTFREALRMGAEIFHTLKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SHEB5 (Enolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S YLGKGV  AV+NVN +I  AL GKD T Q  +D  M+  LDGT N     K KLGANAILAVSLA  KA A  K IPLY HIAEL+G      +PVP  N++NGG HA N + +QEFM+ PVGA  F+EA++MG E++H LK V+
Sbjct:    4 IINVIGREIMDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRYLGKGVLTAVANVNDLIRTALLGKDATAQAELDQIMID-LDGTEN-----KDKLGANAILAVSLAAAKAAAAFKGIPLYAHIAELNGTPGQYSMPVPMMNILNGGEHADNNVDIQEFMVQPVGAKTFREALRMGAEIFHTLKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SHEB2 (Enolase OS=Shewanella baltica (strain OS223) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 116/200 (58.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S YLGKGV  AV+NVN +I  AL GKD T Q  +D  M+  LDGT N     K KLGANAILAVSLA  KA A  K IPLY HIAEL+G      +PVP  N++NGG HA N + +QEFM+ PVGA  F+EA++MG E++H LK V+
Sbjct:    4 IINVIGREIMDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRYLGKGVLTAVANVNDLIRTALLGKDATAQAELDQIMID-LDGTEN-----KDKLGANAILAVSLAAAKAAAAFKGIPLYAHIAELNGTPGQYSMPVPMMNILNGGEHADNNVDIQEFMVQPVGAKTFREALRMGAEIFHTLKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_RHILW (Enolase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 111/195 (56.92%), Postives = 133/195 (68.21%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLK 679
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++    G    +LPVP  N+INGG+HA N +  QEFMILPVGA    EA++MG EV+H L+
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVQKAVDAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYV---GGASACLLPVPMMNIINGGAHADNPIDFQEFMILPVGADTIAEAVRMGSEVFHTLR 189          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_MARMS4.555e-5257.00Enolase OS=Marinomonas sp. (strain MWYL1) GN=eno P... [more]
ENO_BREBN4.555e-5256.28Enolase OS=Brevibacillus brevis (strain 47 / JCM 6... [more]
ENO2_YEAST4.555e-5254.59Enolase 2 OS=Saccharomyces cerevisiae GN=ENO2 PE=1... [more]
ENO_RHIEC5.950e-5256.92Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51... [more]
ENO_PHOPR5.950e-5257.71Enolase OS=Photobacterium profundum GN=eno PE=3 SV... [more]
ENO_SHEB97.770e-5258.00Enolase OS=Shewanella baltica (strain OS195) GN=en... [more]
ENO_SHEB87.770e-5258.00Enolase OS=Shewanella baltica (strain OS185) GN=en... [more]
ENO_SHEB57.770e-5258.00Enolase OS=Shewanella baltica (strain OS155 / ATCC... [more]
ENO_SHEB27.770e-5258.00Enolase OS=Shewanella baltica (strain OS223) GN=en... [more]
ENO_RHILW7.770e-5256.92Enolase OS=Rhizobium leguminosarum bv. trifolii (s... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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