FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_RHIL3 (Enolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=eno PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 111/195 (56.92%), Postives = 133/195 (68.21%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLK 679
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M+ +LDGT N     K +LGANAIL VSLA+ KA A    +PLY+++    G    +LPVP  N+INGG+HA N +  QEFMILPVGA    EA++MG EV+H L+
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIMI-ELDGTPN-----KSRLGANAILGVSLAVAKAAAQASGLPLYRYV---GGASACLLPVPMMNIINGGAHADNPIDFQEFMILPVGADSIAEAVRMGSEVFHTLR 189          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO2_DESHY (Enolase 2 OS=Desulfitobacterium hafniense (strain Y51) GN=eno2 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 111/200 (55.50%), Postives = 140/200 (70.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +  R+I DSRGNPTVEV+V   DG + RAAVPSGASTG +EA+ELRDG    +LGKGV +AV+NVN +I P L G +P +Q AID  ++  LDGT N     K KLGANAIL VSLA  KA A    +PLY+++  ++  +   LPVP  N++NGG HA N + +QEFMI+PVGA  F EA++MG EVYH LKAV+K
Sbjct:    4 IEEIYGREILDSRGNPTVEVEVLLEDGSMGRAAVPSGASTGAFEAVELRDGDKGRFLGKGVLQAVANVNEVIAPELEGLNPFDQPAIDRELIA-LDGTEN-----KGKLGANAILGVSLANAKAAAECVGLPLYQYLGGVNAKE---LPVPMMNILNGGQHADNNVDIQEFMIMPVGAKSFAEALQMGTEVYHSLKAVLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_NEUCR (Enolase OS=Neurospora crassa GN=NCU10042 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 116/204 (56.86%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I+ + AR ++DSRGNPTVEVDV T  G + RA VPSGASTG +EA ELRDG  + + GKGV KAV NVN +IGPAL  +  D  +Q+ +D +++  LDGT N     K KLGANAIL VSLA+ KAGA  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA QEFMI+P  A  F EA++ G EVY  LK++ K+
Sbjct:    3 ISKIHARYVYDSRGNPTVEVDVVTELG-LHRAIVPSGASTGQHEACELRDGDKTKWGGKGVLKAVQNVNEVIGPALIKENIDVKDQSKVDKFLID-LDGTPN-----KTKLGANAILGVSLAVAKAGAAEKGVPLYAHISDLAGTKKPYVLPVPFMNVLNGGSHAGGRLAFQEFMIVPSAAPTFSEALRQGAEVYQILKSLAKK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_LEPBP (Enolase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 115/201 (57.21%), Postives = 138/201 (68.66%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            +I +V+AR+I DSRGNPTVEVDVT  DG   RAAVPSGASTG +EA+ELRDG    Y GKGV KAV NVNA I  ++ G   T+Q  ID  M+  LDGT N     K KLGANAIL VS+A+ KA A    +PLY++I    G     LPVP  N+INGG+HA N +  QEFMILPV A  F+EA++MG EV+H LK V+K
Sbjct:    6 SIRSVRAREIMDSRGNPTVEVDVTLEDGSFGRAAVPSGASTGEHEAVELRDGDKKRYGGKGVQKAVDNVNAKISKSILGLSATDQLQIDGTMI-ALDGTAN-----KSKLGANAILGVSMAVAKAAAVHAGLPLYRYI---GGTFARELPVPMMNIINGGAHADNNIDFQEFMILPVSAPNFKEALRMGAEVFHSLKTVLK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_LEPBA (Enolase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 115/201 (57.21%), Postives = 138/201 (68.66%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            +I +V+AR+I DSRGNPTVEVDVT  DG   RAAVPSGASTG +EA+ELRDG    Y GKGV KAV NVNA I  ++ G   T+Q  ID  M+  LDGT N     K KLGANAIL VS+A+ KA A    +PLY++I    G     LPVP  N+INGG+HA N +  QEFMILPV A  F+EA++MG EV+H LK V+K
Sbjct:    6 SIRSVRAREIMDSRGNPTVEVDVTLEDGSFGRAAVPSGASTGEHEAVELRDGDKKRYGGKGVQKAVDNVNAKISKSILGLSATDQLQIDGTMI-ALDGTAN-----KSKLGANAILGVSMAVAKAAAVHAGLPLYRYI---GGTFARELPVPMMNIINGGAHADNNIDFQEFMILPVSAPNFKEALRMGAEVFHSLKTVLK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ENTFA (Enolase OS=Enterococcus faecalis GN=eno PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 111/200 (55.50%), Postives = 138/200 (69.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT + AR++ DSRGNPT+EV+V T  G   R  VPSGASTG YEA+ELRDG  + YLGKGV+KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSHA N +  QEFMI+PVGA  F+EA++MG EV+H L +++K
Sbjct:    4 ITDIYAREVLDSRGNPTIEVEVYTESGAFGRGMVPSGASTGEYEAVELRDGDKARYLGKGVTKAVDNVNNIIAEAIIGYDVRDQMAIDKAMID-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYHY---LGGFNTKVLPTPMMNIINGGSHADNSIDFQEFMIMPVGAPTFKEALRMGAEVFHALASILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACSK (Enolase OS=Bacillus clausii (strain KSM-K16) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I+ V AR++ DSRGNPTVEV+V    G + RA VPSGASTG YEA+ELRDGG  Y+GKGV KAV NVN  I P L G++  +Q  ID  M+ +LDGT N     K   GANAIL VS+A+  A A+   IPLY ++   +  +   LPVP  N+INGG HA N + +QEFM++PVGA  F+EA++MG E++H+LK+V+K
Sbjct:    4 ISDVYAREVLDSRGNPTVEVEVHLESGVMGRALVPSGASTGEYEAVELRDGGDRYMGKGVQKAVDNVNEKIAPELIGENALDQIGIDRLMI-ELDGTEN-----KGNFGANAILGVSMAVAHAAANALDIPLYVYLGGFNAKQ---LPVPMMNIINGGEHADNNVDIQEFMVMPVGAESFKEALRMGAEIFHNLKSVLK 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACCR (Enolase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV  AV+NVN II P +AG D T+Q  ID  M++ LDGT N     K KLGANAIL VS+A+  A A    +PLY+++   +  +   LP P  N+INGGSHA N +  QEFMILPVGA  F+E+++MG EV+H LKAV+
Sbjct:    3 TIIDVYAREVLDSRGNPTVEVEVYTESGAFGRAIVPSGASTGEHEAVELRDGDKSRYLGKGVVNAVNNVNEIIAPEIAGFDVTDQAGIDRAMIE-LDGTPN-----KGKLGANAILGVSMAVAHAAADFVGLPLYRYLGGFNAKQ---LPTPMMNIINGGSHADNNVDFQEFMILPVGAPTFKESIRMGAEVFHALKAVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACC4 (Enolase OS=Bacillus cereus (strain B4264) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV  AV+NVN II P +AG D T+Q  ID  M++ LDGT N     K KLGANAIL VS+A+  A A    +PLY+++   +  +   LP P  N+INGGSHA N +  QEFMILPVGA  F+E+++MG EV+H LKAV+
Sbjct:    3 TIIDVYAREVLDSRGNPTVEVEVYTESGAFGRAIVPSGASTGEHEAVELRDGDKSRYLGKGVVNAVNNVNEIIAPEIAGFDVTDQAGIDRAMIE-LDGTPN-----KGKLGANAILGVSMAVAHAAADFVGLPLYRYLGGFNAKQ---LPTPMMNIINGGSHADNNVDFQEFMILPVGAPTFKESIRMGAEVFHALKAVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_BACC2 (Enolase OS=Bacillus cereus (strain G9842) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV  AV+NVN II P +AG D T+Q  ID  M++ LDGT N     K KLGANAIL VS+A+  A A    +PLY+++   +  +   LP P  N+INGGSHA N +  QEFMILPVGA  F+E+++MG EV+H LKAV+
Sbjct:    3 TIIDVYAREVLDSRGNPTVEVEVYTESGAFGRAIVPSGASTGEHEAVELRDGDKSRYLGKGVVNAVNNVNEIIAPEIAGFDVTDQAGIDRAMIE-LDGTPN-----KGKLGANAILGVSMAVAHAAADFVGLPLYRYLGGFNAKQ---LPTPMMNIINGGSHADNNVDFQEFMILPVGAPTFKESIRMGAEVFHALKAVL 193          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RHIL37.770e-5256.92Enolase OS=Rhizobium leguminosarum bv. viciae (str... [more]
ENO2_DESHY7.770e-5255.50Enolase 2 OS=Desulfitobacterium hafniense (strain ... [more]
ENO_NEUCR1.015e-5156.86Enolase OS=Neurospora crassa GN=NCU10042 PE=3 SV=1[more]
ENO_LEPBP1.015e-5157.21Enolase OS=Leptospira biflexa serovar Patoc (strai... [more]
ENO_LEPBA1.015e-5157.21Enolase OS=Leptospira biflexa serovar Patoc (strai... [more]
ENO_ENTFA1.015e-5155.50Enolase OS=Enterococcus faecalis GN=eno PE=1 SV=1[more]
ENO_BACSK1.015e-5153.27Enolase OS=Bacillus clausii (strain KSM-K16) GN=en... [more]
ENO_BACCR1.015e-5156.50Enolase OS=Bacillus cereus (strain ATCC 14579 / DS... [more]
ENO_BACC41.015e-5156.50Enolase OS=Bacillus cereus (strain B4264) GN=eno P... [more]
ENO_BACC21.015e-5156.50Enolase OS=Bacillus cereus (strain G9842) GN=eno P... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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