FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CUNEL (Enolase (Fragment) OS=Cunninghamella elegans PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.972e-64
Identity = 139/203 (68.47%), Postives = 156/203 (76.85%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TIT V ARQIFDSRGNPTVEV+VTT  G V RA VPSGASTG++EALELRDG  SDYLGKGV KAV NVN II   L  A     +Q A+D++++Q LDGT N     K+KLGANAIL VSLA+ KAGA  K +P Y HIA+L+G+K   VLPVPAFNVINGGSHAGNKLAMQEFMI+P GA  F EAMK+G EVYH LK VI
Sbjct:    2 TITKVHARQIFDSRGNPTVEVEVTTDKG-VFRAGVPSGASTGVHEALELRDGVKSDYLGKGVLKAVGNVNTIINEELVKANLSVVDQKAVDDFLIQ-LDGTEN-----KEKLGANAILGVSLAVAKAGAAEKGVPFYVHIADLAGSKKPFVLPVPAFNVINGGSHAGNKLAMQEFMIMPTGAKSFSEAMKLGSEVYHTLKKVI 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOA_XENLA (Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 6.776e-64
Identity = 132/204 (64.71%), Postives = 158/204 (77.45%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            ++I  ++AR+IFDSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD     YLGKGV +AV  VN  +GPAL  ++    EQ  ID  M++ +DGT N     K K GANA+L VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F+EAM++G EVYH+LK VIK
Sbjct:    1 MSIKNIRAREIFDSRGNPTVEVDLYTCKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVGRAVKYVNEFLGPALCTQNLNVVEQEKIDKLMIE-MDGTEN-----KSKFGANALLGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGADSFKEAMRIGAEVYHNLKNVIK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SCHJA (Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.849e-64
Identity = 135/205 (65.85%), Postives = 161/205 (78.54%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            + I A+ ARQIFDSRGNPTVEVD+ T+ G + RAAVPSGASTG++EALELRD  S  Y+ KGV  AVSNVN II PAL  K    T Q+ +D +M++ LDG  N     K  LGANAIL VSLA+CKAGA    +PLY++IA+L+G+K++++PVPAFNVINGGSHAGNKLAMQEFMILP GAS F EAM+MG EVYH+LKAVIKR
Sbjct:    1 MAIIAIHARQIFDSRGNPTVEVDLKTAKG-LFRAAVPSGASTGVHEALELRDTNSKAYMCKGVLTAVSNVNNIIAPALLKKQIPVTNQSEVDQFMIE-LDGKEN-----KGNLGANAILGVSLAVCKAGAAELNLPLYRYIAKLAGHKDVIMPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFTEAMQMGSEVYHNLKAVIKR 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO1_TOXGO (Enolase 1 OS=Toxoplasma gondii GN=ENO1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.849e-64
Identity = 131/204 (64.22%), Postives = 152/204 (74.51%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGN--KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            + I  + AR+I DSRGNPT+EVDV+T +G V RAAVPSGASTGIYEALELRD     YLGKGV  AV  V   I PAL GKDP +Q  ID  MV+QLDGT NEWG+ K KLGANAIL VS+A C+AGA  K +PLYK+IA L+G     +V+PVP FNVINGG HAGN LA+QEF+I PVGA   +EA++ G E YHHLK VIK
Sbjct:    2 VVIKDIVAREILDSRGNPTIEVDVST-EGGVFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALLGKDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVINGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIK 204          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOA_SCEUN (Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3)

HSP 1 Score: 243.047 bits (619), Expect = 1.156e-63
Identity = 134/204 (65.69%), Postives = 160/204 (78.43%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN++++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F+EAM++G EVY +LK VIK
Sbjct:    1 MSILKLHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVEHVNKTIAPALVNKKVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNEDVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFKEAMRIGAEVYQNLKNVIK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.509e-63
Identity = 129/204 (63.24%), Postives = 159/204 (77.94%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            + +  + AR+I DSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD   S +LGKGV +AV ++N+ + PA+ G      +Q  IDN M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F++AM++G EVYH+LK+VIK
Sbjct:    1 MAVERIHAREILDSRGNPTVEVDLYTHKG-MFRAAVPSGASTGIYEALELRDNDKSRFLGKGVLQAVDHINSTVAPAIVGSGLSVVDQEKIDNLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKDVPLYRHIADLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRIGAEVYHNLKSVIK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_NEOFR (Enolase OS=Neocallimastix frontalis PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.363e-63
Identity = 135/205 (65.85%), Postives = 159/205 (77.56%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            + IT V ARQIFDSRGNPTVEV+VTT  G + RAAVPSGASTG++EALELRDG  +DY+GKGV KAV NVN  I PAL  A  D   Q A+D+++++ LDGT N     K KLGANAIL VSLA+ +AGA  K +PLY+H+ EL+GNK   +LPVP+ NV+NGGSHAGNKLAMQEFMILP GA  F EA+KMG EVYH LK+VIK
Sbjct:    1 MAITKVHARQIFDSRGNPTVEVEVTTDKG-LFRAAVPSGASTGVHEALELRDGIKADYVGKGVLKAVENVNKTIAPALVAANLDVKNQKAVDDFLLK-LDGTPN-----KSKLGANAILGVSLAVARAGAADKGVPLYQHLGELAGNKGPWILPVPSMNVLNGGSHAGNKLAMQEFMILPTGAKSFTEALKMGSEVYHALKSVIK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOB_CHICK (Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 4.392e-63
Identity = 131/204 (64.22%), Postives = 155/204 (75.98%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            ++I  + AR+I DSRG PTVEVD+ T+ GH  RAAVPSGASTGI+EALE RDG    +LGKGV KAV ++N  IGPAL  K     EQ  ID  M++ +DGT N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLAMQEFM+LPVGA+ F +AM++G EVYH LK VIK
Sbjct:    1 MSIQKIHAREILDSRGEPTVEVDLHTAKGHF-RAAVPSGASTGIHEALEPRDGDKKRFLGKGVLKAVEHINKTIGPALIEKKISVVEQEKIDKVMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNTELILPVPAFNVINGGSHAGNKLAMQEFMVLPVGAASFHDAMRVGAEVYHSLKGVIK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOA_ANAPL (Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.278e-62
Identity = 131/204 (64.22%), Postives = 156/204 (76.47%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K+    EQ  ID  M+  +DG+ N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMI P GA  F+EAM++G EVYH+LK VIK
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALISKNVNVVEQDKIDKLMLD-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMIPPCGADSFKEAMRIGAEVYHNLKNVIK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENOA_DICDI (Enolase A OS=Dictyostelium discoideum GN=enoA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.718e-62
Identity = 134/202 (66.34%), Postives = 159/202 (78.71%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDV-TTSDGHVA--RAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I ++KAR+I +SRGNPTVEVD+ T  DG V+  RAAVPSGASTGIYEA+ELRDG  S YLGKGV KA+ N+  +I PA+ GK  ++Q AID  M+  LDGT N     K KLGANAILAVSLA+C+AGA  + +PLYK+I+E++G K + LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F EA +MG EVYH+LK VI
Sbjct:    4 IKSIKAREILNSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMID-LDGTPN-----KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTK-MRLPVPAFNVINGGSHAGNKLAMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVI 198          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_CUNEL3.972e-6468.47Enolase (Fragment) OS=Cunninghamella elegans PE=2 ... [more]
ENOA_XENLA6.776e-6464.71Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2[more]
ENO_SCHJA8.849e-6465.85Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1[more]
ENO1_TOXGO8.849e-6464.22Enolase 1 OS=Toxoplasma gondii GN=ENO1 PE=1 SV=1[more]
ENOA_SCEUN1.156e-6365.69Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3[more]
ENOG_CHICK1.509e-6363.24Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1[more]
ENO_NEOFR3.363e-6365.85Enolase OS=Neocallimastix frontalis PE=3 SV=1[more]
ENOB_CHICK4.392e-6364.22Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3[more]
ENOA_ANAPL1.278e-6264.22Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 S... [more]
ENOA_DICDI3.718e-6266.34Enolase A OS=Dictyostelium discoideum GN=enoA PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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